Agrobacterium larrymoorei: CFBP5473_12250
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Entry
CFBP5473_12250 CDS
T06268
Name
(GenBank) LuxR family transcriptional regulator
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
alf
Agrobacterium larrymoorei
Pathway
alf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP5473_12250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alf03000
]
CFBP5473_12250
Transcription factors [BR:
alf03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
CFBP5473_12250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_10
Sigma70_r4
HTH_23
HTH_40
MarR_2
FaeA
Motif
Other DBs
NCBI-ProteinID:
QCI98595
UniProt:
A0A4D7DNI9
LinkDB
All DBs
Position
circular:complement(2516643..2517383)
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AA seq
246 aa
AA seq
DB search
MLKPEIDNFAVMGADSAQDLARLQTQFDIFRFLKKMSESWGMKAFMVMNLPPQMALELSH
YTVITNWPAELLHQYDHDGLLATSNVLKELKRGCTPFLVDEAFLTRGQEPSSAKTIVELF
ARFEMSNAIWCPVQDATGMRGAVSLSGSRSSFSPSQVAEIFYLATHIYGRLAHVRSLDAR
IPETLTDREIDCLNWTAAGKTSAEIADILVLSEHTVNHYLNRATKKLDTVNRTQAVAKAL
RVGLIK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacctgaaatagacaactttgctgtcatgggggcggatagcgcccaggacttg
gcacgtctgcaaactcagttcgatatcttcagattcttgaaaaagatgagcgaaagctgg
ggcatgaaggcattcatggtcatgaacctgcctccgcaaatggcgcttgagttgtcgcat
tacacggtcatcaccaactggcccgccgaacttcttcatcaatacgatcacgacggactt
ctggcgacgagcaatgtgctgaaggaattgaagcgcggttgcacgccctttctcgtcgat
gaggcgtttcttacgcgcggtcaggaaccatcgagcgccaagaccatcgttgaactcttt
gcccgcttcgaaatgtcgaacgccatctggtgtcccgtgcaggatgcgaccggcatgcgc
ggtgcggtttcgctctcgggaagccgaagcagcttttctccttcgcaagtggcggagata
ttctacctcgcgactcacatctatggccgccttgcgcatgtgcgaagcctcgacgcgcgc
atccccgaaacgctgacggaccgcgagatcgactgtctcaattggacggctgcgggcaag
acaagcgcggagatcgccgacattcttgttctttcggaacatacggtaaatcactacctg
aaccgcgcgaccaagaagctcgataccgtcaaccgcacgcaggctgtcgcaaaagctttg
cgcgtgggcttgataaaatag
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