Agrobacterium larrymoorei: CFBP5473_12350
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Entry
CFBP5473_12350 CDS
T06268
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alf03009
]
CFBP5473_12350
Enzymes [BR:
alf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CFBP5473_12350
Ribosome biogenesis [BR:
alf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CFBP5473_12350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QCI98615
UniProt:
A0A4D7DNL0
LinkDB
All DBs
Position
circular:complement(2536049..2538061)
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AA seq
670 aa
AA seq
DB search
MTFKDKPKRAGGKTFDRGGKPKSSAKPSEAREKKPFKEKADAPVVETAAGKPERISKIMA
RAGVASRRDVERMIMEGRVSLNGVKLESPVVNATLDDKIEVDGQPIRGAERTRLWLYHKP
AGLVTTNSDPEGRPTVFDNLPGELPRVLSIGRLDINTEGLLLLTNDGGLSRVLELPTTGW
LRRYRVRAHGEVDQAALDKLKDGIAVDGVLYGAIDATLDRTQGHNVWISMGLREGKNREI
KNVLGALGLEVNRLIRISYGPFQLGDLPEGQVIEVRGRMLRDQLGPRLIEAAGANFDAPI
YDHKVEEDEEEAPAKPAKAEWGKQDSGERKSRDGAERPAGRFDNKRSDKPAGKFGAKPAG
KFASKGRDEDEADDRGPKRPPLGSNRTANVWMAPGAKPTRDGKARKLSARAEAESLFKKP
SAQAEARRAIVKHNDDEGSWIRSDSPKEDDRGVRGRGERGERSFGDRKPREAGDRPSRGS
FGDKPRGDRKFGDRPFGDRKPREDGERSFGDRQNRSDRPARGDRSFGDRPARGDRPFSDR
KPREEGDRSPRAERSFGDRPARSERPFSDRKPREDGDRPARSERPFGDKPRGAKPFGGKP
AGGKPGFGKPRGERSEGGAGGRGFGGKGGANKGSGGKGPGNGGGRGPGGKPSGGKPSGGK
GMTRNADRRR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacattcaaagacaagccgaagcgcgctggtggcaagacattcgaccggggcggcaag
ccgaaatcatcggcaaagccgtccgaggcccgtgaaaagaagcctttcaaggaaaaggcg
gatgcacccgttgtagaaacggcagcagggaaacccgagcgcatctccaaaatcatggcg
cgcgcaggcgtggcttcacgccgcgatgtcgagcgcatgatcatggaaggccgcgtttcg
ctgaacggcgtcaagcttgaaagcccggtggtcaacgccaccctcgatgacaaaatcgag
gtggatggccagccgatccgtggtgccgagcgcacacgcctctggctctatcataagccc
gccggtctggtgacgaccaattccgatccggaaggccgcccgaccgtcttcgacaatttg
ccgggtgagcttccgcgcgtgctgtccatcggtcgtctggatatcaacaccgaaggcctg
ctgctgctgaccaatgatggcggtctgtcgcgcgtgctggaactgccgaccaccggctgg
ctgcgccgttaccgcgtgcgcgcccatggtgaggtggatcaggcagcgcttgacaagctg
aaggacggcattgccgtggacggcgtgctttacggcgcaatcgatgcgacgctcgaccgc
acccagggccacaatgtctggatcagcatgggcctgcgcgaaggcaagaaccgcgaaatc
aaaaacgtgctcggcgcgctcggtctcgaagtgaaccgcctgatccgtatctcctacggc
ccgttccagcttggcgatctaccggaaggtcaggtcatcgaggtgcgcggacgcatgttg
cgcgaccagctcggccctcgtctgatcgaggcagcgggcgcgaatttcgatgcgccgatc
tacgaccacaaggtcgaagaggacgaagaagaagcgcctgcaaagccagccaaggccgaa
tggggcaaacaggacagcggcgaacgcaaatcgcgcgatggcgcggaacgtcccgctggc
cgcttcgataacaagcgctccgacaagcccgcaggcaaattcggcgccaagcctgccgga
aagtttgcgtccaagggccgggatgaggacgaggcggatgatcgcggcccgaagcgcccg
ccgctcggcagcaaccgcaccgccaatgtctggatggcgcccggcgccaagcccacacgc
gatggaaaggcccgcaagctttcggcccgcgccgaagcggaaagcctgttcaagaagccg
tcggcacaggctgaagcccgccgcgccattgtcaagcataatgacgatgaaggcagctgg
attcgctccgattcgccgaaggaagatgatcgtggcgtacgtggtcgcggtgaacgcggc
gagcgttccttcggtgacagaaagccacgcgaagcaggcgaccgcccatctcgcggttcg
ttcggcgataagccgcgcggagatcgcaagttcggggatcgtccgtttggcgaccgtaag
ccacgtgaagacggcgagcgctctttcggcgacaggcagaaccgctcggatcgcccggcg
cgtggcgacagatcattcggcgaccgcccagcgcgtggagatcgcccgtttagtgatcgc
aagccgcgcgaagaaggtgaccgttcccctcgggctgagcgttccttcggggatcgtccg
gcccgcagcgaacgtcctttcagcgaccgcaaaccgcgtgaggatggtgatcgtcccgca
cgtagcgagcgtccgttcggcgacaaaccgcgtggcgcaaagccctttggcggcaagcct
gccggtggcaagccgggcttcggcaagcctcgcggtgagcgctccgaaggcggtgccggc
ggtcgtggattcggcggcaagggcggcgcgaataagggttcgggtggcaaaggtccgggc
aatggcggtggacgcggccccggcggtaaaccttccggtggcaagccttctggcggtaag
ggaatgacgcgtaatgcggatcgtaggcggtga
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