Agrobacterium larrymoorei: CFBP5473_13175
Help
Entry
CFBP5473_13175 CDS
T06268
Name
(GenBank) hypothetical protein
Organism
alf
Agrobacterium larrymoorei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALTTAQ_rpt
Motif
Other DBs
NCBI-ProteinID:
QCI98763
UniProt:
A0A4D7DMU3
LinkDB
All DBs
Position
circular:complement(2713273..2720643)
Genome browser
AA seq
2456 aa
AA seq
DB search
MTSIVPSLSVSQIRSMTTSQISEWTTEDISFLSTAQIKALSSDQISALDVEDVETFTTKQ
LSAISTGSIVGLSLDQLAVLTKISIASLSNGQVSALTASQLEALTTDQAEALTPSQIGSL
TSEQLAAMEDEDIRTFSTADMAAISSKAIAGLRLAVMDDFTPAQFAAISTSAFRALTTDQ
IKELTEVQLGALTPAQAAVLTATQASALSAGSITIGSLSSGTIAALSASAISGLTNDVLD
FFSDAQFQAITTKAITGLTTEQIGQLDSGQIGALTAAQIAAFKPTQLAALGPDYVSDLSP
EAIAGLSTTKIASLSTDQIAALTTDQIAGLTTAQMKVLKSTQVAALGEAGVKALTPVQIE
AMGTRAISGLTSEQIDALTDLQVEAFTSAQVKALGSDQIAALKEEQIKKFSTADMAAIGT
GAAAGLSKAIIATLSEAQIAALSSTTFSKLTTDQIGALTTSQLGALTSVQLAALTSTQVT
VFDTKTIAKLSSLAITALSSKAVSGLDTEIIAALTTAQIAALSTGVVARLTSDQIAALSV
DHIEALTSVQIKVLSSSQVSALGTDDIAKFTTDEIAALSTKGITGLSTAAVAALTTSQIK
ALSTAAFAALSTDQLGALDADQLEQLTTLQLSVLKSAQIKSLSTDYINSLTTEQVGSLST
VAVANLTTAQVGALTTAQLAALTSVQVRAMTSAQMSVLESTDLAVFSAADINAISSKAIQ
GLSTAVVASLSVDKIAALATAAVAALTTAQMDVLTASQMLSFSSAQAAVLSSTQLSVLSS
EQVVATLVTIDEKIVQTGGFSTNAIAALSTKGIPGLATSIIAGLTTAQVAALSTSAVSKL
SNDQVSALSSTQVAAFDESRVKAFASTQIGSLSTAAIASLTDTQIAALSANAAKGLTSDQ
IKALSTKQIASLTSAQIAVLTSSQLEGLQAEDIGVISDAAIQAISSKGIAGLSKSVVEAL
TTKQIAKLSTSAVAALSASQIEALTTLQVSAFTTSQISALGSLQAAALDVDDVATFDASE
IKYLSGAAASGLSTAVIKSLTTDKMAALSTSAISKLTSDQIDVLSQDQLKAMTTNQMAAL
SSTQIAVLSTADLAVLTADQVKALQTGAVTNLSDAHLAALTADQLKVLTTTQVAALTSTQ
IAALSTAQIEALTTDQIAAIGTAGITGLTGKQIAAFTTSQAKALTSLQISKLTEDQIEGF
EAEDLAVFSTEDIAAITSGAVVGLSTQVLAALSTTNLSALSKAAIGGLSTKQIGALTTDQ
VGALTTGQIAGLTADQVSSLGTDDITKLTTVQVAAFSASGMSGFSTTQIAAFTSDKVEAL
TAVQVGALSAAQIEVIGTENIKKFSNADVGAISASVIDSLSTAIIAALTTAQITALSTAT
VAGMTTAQIGVLTTGQLVALSTKQIAALTSQQVAALTSDHIASLGTAAFGALSSSAIAGL
STATLAALTNEDLKAISAGGISGLTTAQVAALTIAQIPSLTTKQIAALSSRQVSALGTAG
IGAFDTYQIAALTTDGVTGLSTAQVSQLSLTHAEALTYQQVAVLNSSQVAALSADQLGKF
STKEIASLSAGAVTGLSTDTIAGLTTEIVAALSSTGIAGLTTAQVAALTAAQIGNLTTSQ
VASLSSRQVAALGTVGVGALTAAQISALSDTSVPGLTSDQIVALNTLQIEALKTSQVASL
TSAQVAALGTDDLAVFSTAELAALSSSAILGLSSATLAALPSDRIAYLGSTGGIQGLSTS
QIAALTSAQLGALTTAQIASLGSRQLAALGTASIGALTTAQIAAISSASIPGLTSDQIAA
LNTSQIEAFTSTQVAAFTSTQVSGLGTDDIAVFSTAELSALSSSAIAGMSADTIASLAPD
RIPTLGTASISGLSSAQIAALTSLQIEALTTAQVGALGAKHVVALGTAGVSSLSTTQIAA
LSIAGVAALTTGQITALSTSQVEALTATQIVALSSGQVAALGADDILVFSTEDIAALTSN
GVAGLSDGAIAALTPERVALLNASAVSGLTSSQISTMTVDQVEAFTPEQVAGLGSKQIGA
LSAEKLKAFSTADIAAISATGIGGLSTAIIASLTTDVIASLSTLGISGLATSQIAALTGD
QIGALSTAQVGALTSKQVAALETSDIAELSSAQVAALSVSGVAGLTSDQIAHLTLEQLHA
FSTGQINALTSTAISGLTAEMLDTFTAEKLSAISSAAMPGLTTDFIAALSTGELAALSTG
AVSGLTSKQIAALTPEQIDAFSTTQIAALSADGLAGISADAMATFSTADIAAISAASISG
LSTAIIAALTTADLAALSASQMGSLGYNQVVALSTAQIDSLSTKQLNGLTAIQAAALGTD
DIHVLTTEDIISLGTSAVSGLSTSVIAALTTAQSEALTPAQVGALTSAQIAALSKENIAT
FSTADIAAFSSNGVAGLSTDTLVSLSSAQINTLLNTHMGSLTSDQVAAVISTYLAA
NT seq
7371 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgatcgttccttcgctcagcgtcagccagatcagaagcatgacgacgtcgcag
atatcagagtggacgaccgaggacatttccttcctgagcactgcccagatcaaggctctg
tcgtcagatcagatttccgcgctcgatgtggaagacgtagaaacgttcacaaccaagcag
ctgagcgcgatatcgaccggctccattgttggcctcagcctcgatcagctcgcggtattg
accaagatttcgattgcaagcctgagcaatggccaggtttccgcactgactgcctcgcag
ctggaggcattgaccacggatcaggctgaggcactgaccccctcgcaaatcgggtcgctg
acgtccgagcagctggctgcgatggaagatgaggatattcggacattctcgaccgcagat
atggcggcgatatctagcaaggctatcgcgggcttgagattggccgtgatggacgatttc
accccagcgcaattcgccgccatcagtacgagtgcatttcgcgctttgacgactgatcag
atcaaggaattgaccgaagttcagctgggtgcgctgaccccggcgcaggcagcggtgctt
accgcaacgcaagcctctgccctttctgcagggtcaattacaatcggtagtctctcttca
ggcactattgcagcattaagcgccagcgcgatatcgggtctgacgaacgacgtactggac
tttttctccgatgcgcagtttcaggccatcacgaccaaagccattaccggtcttactacc
gagcagatcgggcagctggattccggtcagatcggtgcgttgaccgcggctcaaattgcg
gcattcaagccgacccagcttgcagcgctcgggcccgactacgtcagcgatctttcaccg
gaggcaatagcaggcctcagcacaacgaaaatcgcatccctttcgacggatcagattgcg
gccctgaccaccgaccagatagctgggctcacaacggcccagatgaaagtgctgaaatcg
acacaggtggcagcacttggtgaggcgggggtcaaggcgttgacccccgtccagatcgaa
gccatgggcacacgtgccatctcgggcctcacgtctgagcagatcgacgcactaacggat
ttgcaggttgaagccttcacgtccgcgcaggtgaaagctttgggctccgatcagatcgcg
gcgcttaaggaagagcagatcaagaaattttccaccgccgatatggcggcaatcggcacc
ggcgctgcggcagggctaagcaaggcaatcatagccacgcttagcgaagctcaaatcgca
gcgctcagctcgacaacattttcgaagctgacgaccgatcagatcggtgcgctaacgacg
tcgcaactgggcgctttgaccagtgttcaactggccgcactaacttctacgcaggtcacg
gtttttgatacgaaaacgattgcaaagctgtcttccctggccattaccgcgctctccagc
aaagcggtttccggcctcgacaccgagataattgcagcgctgacaaccgctcagatcgcc
gctttgagtactggcgtagtcgcaagactgacctctgatcagattgccgcactctctgtt
gatcacatcgaagccttgacgtctgtgcagatcaaagtcctgagctcatctcaggttagt
gcgctgggtacagatgatatagcaaaatttacgaccgacgaaatcgcagcgctttcgacg
aagggcatcactggtctcagcaccgctgccgttgctgcgttgaccacgtcgcagatcaag
gcgttatcgacggcagcctttgcggcgctctctacagatcaactcggcgctttggatgca
gatcagctcgagcaattgacgacgcttcagttgagtgtcttgaaatcggcacagatcaag
tcgctatcgacagactacatcaattctctcacaaccgaacaggtagggtcactcagcacg
gtcgcggtggcaaacctgacgactgcccaagttggagccttgacgacggcgcagctggca
gctctgacgtcggtacaggtcagagccatgacctccgcacagatgtctgtattggagtct
accgatctcgcagtcttttcggcggcagacatcaatgccatcagttccaaggcgatccag
ggtctttcgacagcggtcgttgcgtcgttgtctgtcgacaagattgccgctctggcgaca
gcggcagtggctgcactgacaaccgcgcagatggatgtgctgaccgccagtcagatgttg
agtttctcatctgcgcaagcggccgtattgagctctacgcagctttctgtcctgtcgtcg
gagcaagtcgtcgctactctggttacgattgatgaaaagatcgttcaaaccggcggtttc
tcgaccaatgccatcgctgctctcagcacgaagggcattcccgggctcgcgacctcgatt
atcgccggtttgaccactgcacaggtggccgcattgagcaccagtgccgtctccaagctc
agtaatgaccaggtaagtgccctgtcgagcacgcaagttgcggccttcgatgagagccga
gtcaaagcattcgcttcaacgcagatcggctccttgtccacagcggccattgcatccctg
actgacacgcagattgctgctctttcggcgaacgctgccaaagggttgacctcggatcag
atcaaggcactctccaccaagcagatcgcatcattgacgagcgctcagatcgccgttctc
acatcgtcccagctggaaggtcttcaggcggaagacattggcgtcatttccgatgcagct
attcaagccataagctcgaagggcatcgcaggcctctccaaaagcgttgtcgaagcgctg
acgacaaagcagatcgccaagttgagcaccagcgcggtcgcggcattgagcgcgtcgcag
atcgaggccctcacgacacttcaagtcagcgcttttacgacaagtcagatatctgctctg
ggttcccttcaggcagcagcgctggatgtcgacgacgttgcgacatttgatgcctcagaa
ataaagtatctttcgggcgcggcggcttcaggcctcagtacagcggtgatcaaatcgctg
acgacggacaagatggcagctttatcgacttcggccatttcgaaactgacttctgaccag
atcgatgttctcagtcaggatcagttgaaggcaatgacgaccaatcagatggcggcgttg
agctccacgcagatcgcggtgttgagcactgccgatcttgccgtcctgacagcagatcag
gtcaaagctttacagactggggctgtgacaaacctttcagatgcacatctcgctgcattg
acggctgatcagctgaaagtgctgacgacaacgcaagtcgcagcactgacttcaacccag
atagcagcgctgagcacggcacagatcgaagctcttacgactgatcagattgccgcaatc
ggaactgcgggtattaccgggctgaccggcaagcagatcgctgctttcactacaagtcag
gcgaaggcactgacctctctacaaatctccaaattgaccgaggatcagatcgagggattt
gaggcagaggatcttgcggtcttctcgaccgaagatatcgcagcgatcacatcgggcgca
gtggtgggtctttcgacccaagttttggcggcgttgtcgaccaccaatctttcggcatta
agcaaggcggcgattggtggactttcgaccaagcaaatcggggctctgaccaccgatcag
gtgggcgccttgacaacggggcaaattgccggcctaaccgccgatcaggtctcttccctg
ggcaccgatgacataacaaaattgacgacagtccaggtagcagctttcagtgccagcgga
atgtcgggctttagtaccactcagattgctgcttttacatcggacaaggttgaagcactg
acggctgttcaggttggtgcattaagtgcagcgcagatcgaggtcatcggtactgagaac
atcaaaaagttctctaacgctgacgttggagcgatcagcgccagcgtcatcgattccctt
tcaacggcgattattgcagcactgacgacggcccagatcactgctctgagcactgccacg
gtggctggtatgacgacggctcagatcggtgtactgacgaccggacagctggtcgcgctt
tctaccaagcagattgcagcgctgacgtcacagcaggttgctgcgcttacctcggaccac
attgcatcgcttggcacggcagccttcggcgcactcagttcgtcggcgatagccgggctt
tccaccgcgacgctcgcagcattgacaaacgaagatctgaaagccatcagcgcgggaggc
atttcaggcctgacgacagcgcaggtggcagccttgaccattgcccagataccgtcgctg
acaacgaaacagatcgctgccttgtcctccagacaggtttcggcgcttggaacggcaggt
atcggtgctttcgacacctatcagattgctgcactgacgacagacggtgtcacgggcctt
tcgaccgcccaggtttcgcaactcagcctgacccatgccgaggcgctgacctatcagcag
gtagcggtgctaaactcgtcgcaggtggcggcactgagtgccgatcaactcggcaagttc
tcgacaaaggaaattgcgtctctatccgcaggcgcggtaaccggtctttccaccgatacg
atagcgggactgacgactgaaatcgttgcagctctgtcatcgaccgggattgccggactg
acaacggctcaggtcgcggctctaaccgcagcccagatcggtaatctgacgacgtctcag
gtcgcgtcactgtcttcccgtcaggtcgctgcgctgggaacggttggcgtcggcgcattg
acagcggcccagatttcggcgctcagcgataccagcgtacctggactgacatctgatcaa
atcgtggctttgaacacgttgcagatcgaagcgctcaagacttcccaggttgcgtcgctg
acgtcggcacaggtggcggcgctcggaacggatgatcttgcggtgttctcgacggcggag
cttgccgccctgagttccagcgcgatccttggtctttcttctgcaacgctcgcggcacta
ccaagcgaccgcattgcctatctcggcagcacgggcggcattcagggactgtctacatcg
cagattgccgcactgacgagtgcccagcttggagcgctgacaacggcgcagatcgcttcg
ctaggatcacgtcagcttgcggcactcggcacggcgtccatcggcgccctgacgacggcg
cagattgcggctatcagctccgccagcattccggggctgacgtcggatcagattgcagcg
ctcaatacgtcccagatcgaggcctttacatccactcaggtcgcagccttcacctcgacg
caggtgagtggacttggaacggacgacattgccgtcttctcgacagcggagctttccgct
ctttcttcctcggctatcgcaggcatgtccgcggatacgattgcaagccttgctccggat
cgtattccaacgctcggaacggccagcatctccggcctatccagtgcgcagatcgctgcg
ttgacgagcctgcaaatcgaggcgctgacaacggcgcaggtgggagcgcttggcgccaag
catgtggtggcgctgggaacagcaggtgtcagctctctgtctacgacgcagattgccgcg
ctcagcattgcgggcgttgctgcgctcaccactggccagatcacagcgctttcgacttca
caggtcgaagcactcaccgccacacagatcgtcgcgctaagctctggtcaggtcgcagcc
ttgggagcagacgacattctggtcttctccaccgaagacatcgctgctctgacatccaac
ggcgtagccggtctgtccgatggcgcgatcgcagccctgacgccggagcgtgtcgctctt
ctcaacgcctctgcggtctccgggctgacctccagccagatcagcaccatgaccgtcgat
caggtcgaggcgttcacgcctgaacaggtggcgggtctggggtcaaagcagatcggcgca
ctgagcgcagaaaagctgaaggccttctccactgccgatatcgctgcaatcagcgcgacg
ggtatcgggggattgtcgaccgcaatcatcgcctcgctgaccaccgatgtcattgcctcc
ctgagcacgctcggtatctccgggctggcaacgtcacaaatcgctgccctgaccggcgac
cagatcggcgctctttccaccgcgcaggtgggggcgctgacgtcgaagcaggttgctgcg
ctggagacatcggatatcgcggagctttcaagcgcgcaggtcgcggctctcagcgtcagc
ggcgtagccggtctcaccagcgatcagatcgcgcatctcacgcttgagcagctgcatgcc
ttctcaaccggccagatcaacgcgctgacttccaccgcgatctctggcctgacggcggag
atgctggatacgtttaccgccgaaaagctgtcggccatcagttctgccgccatgccgggt
ctaacgacggacttcatcgcggccctgtcgaccggcgaactcgcggcactgagcaccggg
gcggtatccggactgacgagcaagcagattgcagcgctgacgccggagcagatcgacgcc
ttctcgacgacgcagattgcggcgctcagcgccgatggtctcgcggggatttcggcagat
gcgatggcgacattctcgacagccgatattgccgcgatcagcgccgcttcgatcagcggc
ctgtcgacagcgatcatcgctgcactgaccacggctgatcttgcagctctcagtgcaagc
cagatgggttctctcggttacaatcaggttgtcgcgttgagcaccgcgcagatcgattcg
ttgagcacgaagcagttgaacgggctgacagcaattcaggcggcagctcttggcaccgat
gacattcacgtcctgacaaccgaggacatcatttccctcggtacgagtgcggtctctggt
ctgtcgacaagcgtgatcgcggcattgaccacggcacagagcgaagcgctgacgcctgca
caggtgggggcgctcacctcggcacagatcgcggctctgtccaaggagaatatcgcgaca
ttctccacggcagatatcgcggccttcagctcgaacggtgtcgcgggtctttcgaccgat
acgctggtcagcctgtccagcgcgcagatcaacacgttgctcaacacccacatgggttcg
ctgacatcggatcaggtcgcggctgttatatccacctatctggcggcctga
DBGET
integrated database retrieval system
