Agrobacterium larrymoorei: CFBP5473_13995
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Entry
CFBP5473_13995 CDS
T06268
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
alf
Agrobacterium larrymoorei
Pathway
alf02020
Two-component system
alf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CFBP5473_13995
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CFBP5473_13995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
alf02035
]
CFBP5473_13995
Bacterial motility proteins [BR:
alf02035
]
Flagellar system
Chemotaxis proteins
MCPs
CFBP5473_13995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
HAMP_2
4HB_MCP_1
DUF948
BLOC1_2
Fib_alpha
COG6_N
PIN_8
IFT57
Motif
Other DBs
NCBI-ProteinID:
QCI98906
UniProt:
A0A4D7DXI9
LinkDB
All DBs
Position
circular:complement(2898028..2900052)
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AA seq
674 aa
AA seq
DB search
MKIRSKINLLVGLLSLVACSIGGLSIYAINKYHDQALALDSVADRARHGETLNRLVTAVV
MEARGVYAAKDTAAAAKFSDGIVKNLDDMAALLKEWKPQVPAYQAASFDNIEKRFAEFRT
FRTETARLGREVSPQDANTQGNNEANRENRKAYQTEIDAVVKNDLKELDTIKADIEDFGE
LILLAVGLVTVIGVAAGTIGGLYIGSRQLSAPILKVSEVMNAVADGNLDTDVPYLDRKDE
IGEMAAAVEVFKRNGLEVRRMNAQETAMRAKSDDLQAGMAEVVGAAAQGDFGRRITKDYG
DDNLNRFARNINDLLTSVDSGVSETGRVMANLAHGDLTQSMNGNFHGVFAELQANVNETL
SKLKATMSEVRGSTESINGNANELRAAADDLSKRTEQQAAALEETSAALDEITAVVKNST
ERAQEASTMVSETKEKTAHSAKVVRDAVNAMGRIEQASREISQIINVIDEIAFQTNLLAL
NAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKDIKALITKSGHEVGNGVTLVQQTGA
ALDEIETRVLSINDHIHSIATAAKEQSTGLQEVNTAINQMDQVTQRNAAMVEETSAATHK
LSGEAATLVSLVGRFRLGNETSSASAYAAPARPSSATAKSAPVASPARKMMGSVARAFSG
SAAVAQSRDEWQEF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatccggagtaagatcaatcttctagttgggctgttgagcctcgttgcttgcagc
atcggcggtctctccatctacgcgatcaataaatatcacgatcaggcgcttgcgctcgac
agtgttgcagatcgcgcccgccacggcgaaaccctcaaccgtctcgtaaccgcagtcgtc
atggaagcacgcggtgtctacgccgcaaaggatacggctgctgccgccaaattttccgat
ggcatcgtcaaaaacctggatgacatggcggcactgctgaaggagtggaagccgcaggtt
cccgcttatcaggccgcttccttcgacaatatcgagaagcgtttcgccgaattccgcacc
ttccgcacggaaaccgcgcgccttggccgggaagtgagccctcaggacgccaatacgcaa
ggcaacaacgaggccaaccgcgaaaaccgcaaggcctatcagacggaaatcgacgcggtc
gtcaaaaacgacctcaaggaactcgatacgatcaaggccgacatcgaagatttcggcgaa
ctgattttactcgccgtcggtctcgtcacggtcatcggtgtcgccgccggcacgatcggc
ggtctttatatcggctccagacagctgagcgcgccgatcctcaaggtatcggaagtcatg
aatgcggtggctgacggaaatctcgatacggacgtgccctatctcgaccgcaaggacgaa
atcggcgaaatggccgcagccgtcgaagtcttcaagcgcaatgggcttgaagtgcgccgc
atgaacgcgcaggaaaccgccatgcgcgccaagagcgacgaccttcaggccggtatggcg
gaagtcgtgggcgcggcagcgcaaggggacttcggtcgtcgcatcaccaaggattacggc
gacgacaatctcaaccgcttcgccagaaacatcaacgatctcctgaccagcgtcgatagc
ggcgtgtccgaaacaggtcgcgtcatggcaaatctcgcccatggcgatttgacgcaatcg
atgaatggcaacttccacggggtgtttgccgaacttcaggccaacgtcaacgaaacgctt
tccaagctgaaagccaccatgtcggaagtgcgcggcagcaccgaaagcatcaatggcaac
gccaacgaactccgcgcggctgccgacgacctctccaagcgcaccgagcagcaggcggca
gctctcgaggagacctcagccgcgctggacgagatcaccgctgtcgtgaagaattccacg
gagcgcgcccaggaggccagcaccatggtttccgaaaccaaggaaaagacggcccattcc
gcaaaggtcgtccgcgatgcggtcaatgccatgggccgtatcgagcaggcctcgcgtgaa
atcagtcagatcatcaacgtgatcgacgagatcgcattccagaccaatcttctggctctc
aatgcgggtgtggaagcggcgcgcgcgggtgaagcgggcaaaggctttgccgtcgtggca
caggaagtgcgtgagcttgcgcagcgttccgccaatgcggcgaaggatatcaaggcgctc
attaccaagtccggtcatgaagtcggcaacggcgtgacgctggtgcagcagacgggggct
gcactggatgagatcgagacgcgcgtcttgagcatcaacgatcacatccattccattgcc
accgctgccaaagagcagtccaccggtctgcaggaagtcaatacggccatcaaccagatg
gatcaggtaacccagcgcaatgcggccatggtggaggaaacctccgccgccacccacaag
ctgagtggcgaagcagccacgctggtctcgctggtcggtcgcttccgcctcggcaacgag
acctcttcagcctctgcctatgcggcaccggcacggccttcttccgccaccgcgaagtcc
gctccggtcgcctcaccggcccgcaagatgatgggcagcgtcgcccgcgccttcagcggc
tccgctgccgttgcgcagagcagggacgagtggcaggagttctga
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integrated database retrieval system
