Agrobacterium larrymoorei: CFBP5473_14265
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Entry
CFBP5473_14265 CDS
T06268
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alf03032
]
CFBP5473_14265
03036 Chromosome and associated proteins [BR:
alf03036
]
CFBP5473_14265
03400 DNA repair and recombination proteins [BR:
alf03400
]
CFBP5473_14265
DNA replication proteins [BR:
alf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CFBP5473_14265
Chromosome and associated proteins [BR:
alf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CFBP5473_14265
DNA repair and recombination proteins [BR:
alf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CFBP5473_14265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
QCI98955
UniProt:
A0A4D7DPB3
LinkDB
All DBs
Position
circular:complement(2951494..2951799)
Genome browser
AA seq
101 aa
AA seq
DB search
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAAGNRVELRGFGAFSVKNRPSRS
GRNPRTGESVFVEEKWVPFFKTGKELRERLNPGMGDIEDED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
gtgattaagtctgaactggtgcagatcgttgctgcgcgtaacccgcacctttaccaccgt
gacgtggaaaatatcgtcaacgcggttctcgatgagattacggatgcgcttgccgctggt
aatcgcgtcgagcttcgcggcttcggcgcattctccgtcaagaatcgcccgtcgcgttcc
ggacggaacccacgcacgggtgaatctgtttttgtcgaagaaaagtgggttccattcttc
aagaccggcaaagagcttcgcgagaggctgaaccccggcatgggcgatatcgaagacgag
gattga
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