KEGG   Agrobacterium larrymoorei: CFBP5473_15435
Entry
CFBP5473_15435    CDS       T06268                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
alf  Agrobacterium larrymoorei
Pathway
alf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:alf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CFBP5473_15435 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:alf02044]
    CFBP5473_15435 (tssM)
Secretion system [BR:alf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CFBP5473_15435 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF5381
Other DBs
NCBI-ProteinID: QCI99405
UniProt: A0A4D7DQ77
LinkDB
Position
linear:234702..238184
AA seq 1160 aa
MNPLSYFYTIRSYVDSYAGIIGRRFVSLIWAIALCVVIWFYGYLIAFGDFKPFGTTQARL
IAIGVILLVWVVYIAITLFRARKQDKELVDSIEQEALANRNAEVGEIQTRLKEALALLRR
VTKKRFGYIYDLPWYVIFGAPGSGKTTALTNSGLQFPLGDALGESAVKGIGGTRNCNWWF
TDEAILIDTAGRYTTQDDLDGSSKAGWEGFLNLLRRYRRSQPINGALVTLSIPDLLTRDP
EEQRQELRSIRQRLSELDEYLHARVPVYLVLTKADLLDGFVEFFDGFNKTDRQQVWGTTF
KLDESYTSPSLPQRFMEEFELLQQRVDAMLIERLQQEQNAEIRGRIFRFPAEMAKLKDRL
HEALGELCASSPLIEAPLLRGVYFASGTQPEVNTATTRARRSYFLSRLFKEVIFPEAALV
MRDKRLSGRQLLVRRIAYGVSAAIVAIVFTGWISTYFSNTQALAEADRKLNAYEQLVQGI
PVRDVSDADFLRIMPALDNLRDASSGFSKDRVWKVGFGLDQKDKIAGRQRDAYQRALNAL
LLPRMIVQLQKQLADEKDVTRTFNSLKLYGMLGGLGNLDRDFLTVQAQNMFASLYPGDGR
AAARASLNGHARALADGILAPIELDARLIAKARKTIKEQAIGTRAYDILAGLPQARALPE
WTPSSAFGPLGERAFERKSKTPLVDGIEGLFTADGYRNVVIPQVSYASRVALSEAWVRGS
DDAIRGATVEQVAQAALQIYFDRFEKRWADTLSDIRVKPSQSLGDAVETTRILANDRNIV
AEGARSIADATDLRPNAGASLTTLASTADGDTTSTILAATVDAADPYARLRDMLAAKSTA
APSDGQTGSNKAAGSPSEQLLANLKTLNEQLARSSTTSDEVAKVFDVDSQLTKANQDLLQ
QARQLPAPLDVWIAGVSADVGSLAVKSARSRIADLWAADSASLCSSIVSGRYPFDRASPR
DVAMADFTRLFGPTGVFQSFFKQRMEPFVDKTTAPWSWKGTFGSAGIPSDAIAQFENADK
IFRAFFPNGSEVPAVSINVKPVSLTNESSAVMLEIEGERVVYYHGPIQAKSINWPSQENS
ANLSRIAFQPGGWQQAKTENGDWSPFRLFDDAKIEGQTGDILRARFENGGQVAEFDIQFG
SVLNPFRLDALSRFSCPAQF
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgaatccgctgagttatttttatacgatccggtcttatgtcgatagctacgcaggtatc
ataggtcgccgatttgtttcgctgatctgggcaatcgcgctttgcgtcgtcatctggttc
tacggctatctcattgccttcggtgatttcaaaccgttcggcaccacacaggctcgcctt
atcgccattggcgtcattctgctggtctgggtcgtctatattgccatcaccctgttccgc
gcccgcaagcaggacaaggagctggtcgacagtatcgaacaggaagctctggccaaccgc
aatgcggaagtcggagagatacagacccgcctgaaggaagcgcttgcgcttcttcgccgc
gttaccaagaaacgcttcgggtatatctatgacctgccctggtatgtcattttcggtgca
ccgggctcgggtaagacgactgcgctgaccaattccggtttgcaatttcctctcggagat
gcactgggcgaaagcgccgtgaaaggcattggcggcacccgcaattgtaactggtggttc
acggatgaagccattctcatcgacactgccgggcgctacaccacgcaggacgatctcgac
ggttcctcgaaggcaggctgggaaggcttcctcaatctcctgcggcggtatcgccgctcg
cagccgatcaatggtgcgctggtcacgctttccatcccggatctactgacccgagacccg
gaggagcagcggcaggaactgcgctccatccgccagcgcctgtctgaactggacgagtat
cttcacgcacgggtaccggtttatctggttctgaccaaggctgatcttctcgatggcttc
gtggagttcttcgacggtttcaacaagactgatcggcaacaggtgtggggcaccactttc
aagctggatgaaagctacacctcgccatcgctgccgcagcgtttcatggaagagttcgag
cttctgcaacagcgcgtcgacgccatgctgatcgagcgcttgcaacaggagcagaacgcg
gaaatccgtggtcgcatcttccgcttccccgccgaaatggcaaagctgaaggaccgactg
catgaagctctgggggagctctgcgcaagctcgccgctgatcgaagcaccccttctgcgc
ggcgtttactttgcttccggcacccagccggaagtgaacacagcaacgacccgcgcgcgt
cgcagctacttcctctcgcgattgttcaaggaggtgatcttcccggaagcggcactcgtc
atgcgggacaagcgactctcgggccgccagcttctcgttcggcgcatcgcttatggcgtc
tccgcagccattgtcgccatcgtctttaccggctggatcagcacctatttttccaacacg
caggcgctggcagaagcggaccgaaagctcaacgcctatgaacagctggttcaaggcatt
cctgtccgtgatgtttccgatgcggatttcctgcgcatcatgcctgctctcgataatcta
agggacgcaagctccggcttctccaaggatcgtgtctggaaagtaggtttcggcctcgat
cagaaagacaagattgcgggacggcaacgcgatgcctatcaacgcgcgctgaacgccctg
cttctgccgcgtatgatcgtgcaactgcaaaagcagttggcggatgaaaaggatgtgacg
aggacgttcaactcgctgaaactttacggcatgctgggcgggcttggaaatctcgaccgc
gatttcctgaccgtgcaggcgcagaatatgttcgcctcgctttatccgggtgatggacga
gcggctgcgcgtgcatcgcttaacggccatgcccgtgctcttgccgatggaattctggca
cccatcgaactcgacgctcgcctgatcgcgaaggcacgcaagaccatcaaggagcaggcc
atcggcacgcgcgcctatgatattctggccggattgccgcaggctcgcgctttgccggaa
tggacaccatcctccgccttcggtcctcttggcgaacgcgcattcgagcgcaaaagcaag
actcctttggtggatgggatagaaggtctgttcacggcagatggctatcggaacgtggtc
attccgcaggtgtcttacgcctcgcgcgtggcgctttccgaggcctgggtgcgtggatcg
gatgatgccattcgcggcgcgaccgttgagcaggtggcgcaggcggcattgcaaatctat
ttcgaccgttttgaaaagcgttgggccgatacgctttcggatattcgcgtgaagccctcg
cagtctctgggggatgccgtggaaacgacgcgcattctcgccaatgatcgaaatatcgtt
gcagagggggcgagatcgatcgccgatgcgaccgatcttcggccaaatgcgggtgcaagc
ctgaccacgctcgcttccacggcggatggcgatacgacgtccacaatcctcgctgcaaca
gtcgacgccgcggacccatatgcacggctgcgtgatatgctggcggcaaaatccacagcc
gcaccgtcggatggacagacaggaagcaacaaggctgccggttctccatcggagcaattg
ctcgccaacctgaaaacgctgaacgagcaattggcacgctcctccaccacttcggacgag
gtggctaaggtgttcgatgtcgacagccaattgacgaaagccaatcaggatctgcttcag
caggcaaggcagcttccggcaccgctggatgtctggattgctggcgtttccgcagatgtc
ggttcgctggcggtaaaatccgcgcgcagccgcattgccgatctttgggcggcagactcc
gcgtctctctgctcatccatcgtcagtggaagatatccgttcgatcgcgcatcgccacgc
gatgtggcaatggcggatttcacccgcctgttcggaccaaccggtgtgttccagagcttc
ttcaagcaacgcatggaacccttcgtggacaagacgacggcgccgtggagttggaagggc
accttcggatccgcaggcattccaagcgatgcaattgcgcagttcgaaaatgccgacaag
attttccgggcgtttttccccaatggcagcgaggttcctgcggtctcgatcaacgtcaaa
cccgtttcgctcaccaatgaatcgagcgcggtcatgctggagatcgagggcgagcgtgtg
gtctattatcacgggccgatccaggcgaagtccatcaattggccgtcgcaggaaaactca
gccaatctttcccgcatcgctttccagcccggtggctggcagcaggcgaaaaccgaaaat
ggtgactggtcgccgttccggttgttcgacgatgctaaaattgaggggcagaccggagat
attctgcgggcccgctttgaaaatggcggacaggtggcggagttcgacattcagttcggc
tctgtcctcaatccattccggctggatgcgctatcgcgcttttcctgcccggcacaattt
taa

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