Agrobacterium larrymoorei: CFBP5473_16520
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Entry
CFBP5473_16520 CDS
T06268
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
alf
Agrobacterium larrymoorei
Pathway
alf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP5473_16520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alf02000
]
CFBP5473_16520
Transporters [BR:
alf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CFBP5473_16520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QCI99593
UniProt:
A0A4D7DQE1
LinkDB
All DBs
Position
linear:complement(481824..483419)
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AA seq
531 aa
AA seq
DB search
MDLTRRKTLLLGAAFGGAVLLPSLSFAETQTPSKGGIVTFAGLGEPTTLVPLSDSNTRTR
AISTKILEGLVRFDSEFKPHPVLAESWDVSSDGLRYTFRLRQGVKWHDGKNLTSADVKFS
LLAFKKVGPRGRITFASIADIETPDPLTAIVVLSKPAPYLLRALVGGETPILPAHAYPSE
NYSESQNGNAPIGTGPFIFEEWKRGSYVKLKRNPNYWQAGLPHLDGFIARFVADAGSATI
AVETGEADYATDVSYGDLERLRQDPKLAVDVYTDAYLNNAAVFEFNLENPILAKKEVRHA
LAHAIDRDFINDAIFYGTAKPAGSNIPSVFTDYNDETPFKYPFDLAKANALLDEAGYPKA
ADGTRFSLRLAFLPSDVFRKTSEYLRSSFGKLGVKVETLDGDLATFIKRVYTERGFDLTV
NGISRLFDPTAGVQRLYWSDGIKNPAPYVNAAHYNNPKVDDLFRAAAIESDETKRAAQFK
EIQKITGDELPNFSIVALPTVILRNANLQSLVTTIDVAYSDLATAWKQPQS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatctgacgaggcgtaagacattacttttgggtgcggcgttcggcggtgcagtactt
ctgccatcgctgtcctttgccgaaacacagacaccgagcaagggcggcatcgttacgttt
gcagggttgggcgagcctacgacgcttgtaccgctgtcggacagcaatacgcgcacgcgc
gcaatttcaacgaaaattctcgaaggactggtgcggttcgacagcgagttcaagccgcat
cccgttctggctgaaagctgggatgtgtccagcgatggtctgcgctacaccttcaggcta
cgccaaggtgtaaaatggcacgatggcaaaaacctgacctcggcggatgttaaattctct
ctgctggccttcaagaaggtgggaccgcgtgggcgcatcacatttgccagcattgccgat
atcgaaacacccgatccgttgaccgccattgtggttctatccaaaccggcaccttatttg
ctgcgggcgctcgtcggcggggaaacgccgatcctgccagcgcatgcgtatccgtcggag
aattacagcgaaagccagaacggcaacgcgcctatcggtaccggccctttcatcttcgaa
gagtggaagcgtggcagctatgtgaagctgaagcggaacccgaattactggcaggctggt
ttgccgcatctcgatggcttcatcgcacgttttgttgctgatgctgggtcagcgacaatc
gcagtggaaacgggtgaggcagactacgcgaccgacgtatcctacggcgatctggaacgc
ctgcggcaagatccgaaactggctgtcgatgtctatacggatgcctatctgaacaacgca
gccgtcttcgagttcaatcttgaaaaccccatactcgccaagaaagaggttcgtcacgca
ctggcccacgccatcgaccgagactttatcaacgacgccattttttatggtacggcaaag
cccgccgggtcgaacattccgtcggtctttaccgactataatgacgaaacgccgttcaag
tatcctttcgatcttgccaaggccaacgcgttactcgacgaggctggctatccgaaagcg
gcggatgggacgcgtttttcgctgcggctcgcctttctgccgtcggacgtttttcgcaaa
acctctgaatatctgcgctcgtcatttggcaagctgggggtaaaggttgaaacgctcgac
ggtgatctcgccaccttcatcaagcgtgtctacaccgaacgcggcttcgatctgaccgta
aacggtatcagccgtctgttcgacccgactgcgggtgtgcagcggctttactggtcggat
ggcatcaagaacccggcaccctatgtcaacgcggcgcattacaacaatccgaaggtggat
gaccttttccgcgccgctgccatagagagtgatgagacaaagcgtgcggcgcagttcaag
gaaattcaaaagatcaccggcgatgagttgccgaatttctcaatcgttgcgctgccgact
gtcattctaagaaacgccaatctgcagtctctcgtgacgaccatcgatgtcgcctatagc
gatctcgccaccgcatggaagcaaccgcaaagctga
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