Agrobacterium larrymoorei: CFBP5473_18360
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Entry
CFBP5473_18360 CDS
T06268
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
alf
Agrobacterium larrymoorei
Pathway
alf03030
DNA replication
alf03430
Mismatch repair
alf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFBP5473_18360
03430 Mismatch repair
CFBP5473_18360
03440 Homologous recombination
CFBP5473_18360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alf03032
]
CFBP5473_18360
03400 DNA repair and recombination proteins [BR:
alf03400
]
CFBP5473_18360
Enzymes [BR:
alf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFBP5473_18360
DNA replication proteins [BR:
alf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFBP5473_18360
DNA repair and recombination proteins [BR:
alf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFBP5473_18360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
QCI99922
LinkDB
All DBs
Position
linear:883465..884583
Genome browser
AA seq
372 aa
AA seq
DB search
MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRASGANLDMKATDLDLEVTEATPAM
VEQAGATTVPAHLLYEIVRKLPDGSEVLLATNPDGSSMTVASGRSKFSLQCLPEADFPDL
TAGTFSHSFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESGGDLKLRAVATDGH
RLARADVDAPSGSEGMPGIIIPRKTVGELQKLVDNPELEVAVEVSDAKIRLTIGDIVMTS
KLIDGTFPDYQRVIPTGNDKEMRVDCVSFAKAVDRVSTISSERGRAVKLALTEGQLTLTV
NNPDSGSATEEVAVGYEHDAMEIGFNAKYLLDITAQLSGEDAIFLLADAGSPTLVRDTAG
DDALYVLMPMRV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattactcttgagcggtccaaccttctgaaatcgctgaaccacgttcatcgcgtg
gtggaacggcgcaataccatcccgattctgtccaacgtgctgctgcgcgcatcgggcgcc
aatctggatatgaaggcgaccgacctcgatctggaagtcaccgaagcgacaccggccatg
gtggagcaggcgggcgcgaccacggttcccgcacatctgctctatgaaatcgtgcgcaag
cttccagatggttccgaggttctgctcgcgaccaatcccgatggctcttcgatgacggtt
gcttctgggcgttccaagttctcactgcaatgcctgccggaagcggacttcccggatttg
accgctggcaccttcagccacagcttcaagctcaaggcgaccgatctgaaaatgctgatc
gaccgcacgcagtttgcaatttccacggaagagacgcgctactatctgaatggcattttc
tttcacaccatcgaaagcggcggcgacctgaaactgcgtgccgtggcgaccgacggtcac
cgtctggcgcgcgcggatgtggatgcgccgtccggctccgagggcatgccgggcatcatc
attccgcgcaagaccgttggcgagttgcagaagctggttgacaatcccgagcttgaagtc
gccgtagaagtctccgatgcgaaaattcgcctcacaatcggcgatatcgtcatgacctcg
aagctcatcgacggcaccttcccggattatcagcgcgttattccgacaggcaacgacaag
gagatgcgcgtcgattgcgtcagcttcgccaaggcggtcgatcgtgtttcgaccatctct
tccgaacgcgggcgcgccgtgaagctggccctgaccgaaggtcaattgacgctgaccgtc
aacaacccggattcgggcagcgcgacggaagaagttgccgttggctacgaacacgacgcg
atggaaatcggcttcaacgcgaagtacctgctggatatcaccgcgcagctttccggcgaa
gatgcgatcttcctgctggcggatgccggctccccaacgctcgttcgcgacacggcaggc
gatgacgccctctacgtgctgatgccgatgcgcgtttga
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