Agrobacterium larrymoorei: CFBP5473_19670
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Entry
CFBP5473_19670 CDS
T06268
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
alf
Agrobacterium larrymoorei
Pathway
alf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CFBP5473_19670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alf03400
]
CFBP5473_19670
DNA repair and recombination proteins [BR:
alf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CFBP5473_19670
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QCJ00149
UniProt:
A0A4D7DUI3
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All DBs
Position
linear:1168731..1169510
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AA seq
259 aa
AA seq
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MPRQTFWKGHLRLSLVTAKVSLTPAISQSGKIRFHVINRETGNRVESRYVDSVTHRPVAD
KNQVKGFPKEDGDYVLLEEDEIDAVALESTRTIDIQTFVPAGSIDWIWYDRPHFLKPEDK
IGAEAFSVIREAMKANKVVGIARLVLYRREHAVLLEPSGKGIILWTLHYGEEVREAVDTV
DSKTKADKELHEALDRQIEKQLTGWKPSLVQDTVQKKVQKLLKTKAKELPKSKAKKPAAA
KQGGNVINIMDALKKSLKA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggcagacgttctggaaaggtcatctgagattgtcgctggtcacggccaaggtg
tcgctgacgcctgcgatttcgcaaagcggcaaaatccgtttccacgtcatcaatcgcgaa
acgggaaatcgcgtggaaagccgttatgtggacagtgtcacgcaccggcccgtagcggac
aagaaccaagtcaagggctttcccaaggaagacggtgattacgttctgcttgaggaagac
gagatcgacgccgtggcgctggaaagcaccagaacaatcgacattcagaccttcgttccg
gcaggctccatcgactggatctggtacgaccgcccgcatttcctcaagcctgaggacaag
atcggtgccgaggctttcagcgtcattcgtgaggcaatgaaggcgaacaaggtggttggc
atagcaaggctcgttctgtaccggcgcgaacatgccgtgctgctggagccttccggcaag
ggcatcattctctggacgctgcattacggcgaagaggtgcgcgaggcggtcgatacggtc
gacagtaagaccaaggcagacaaggaactgcatgaggcgctggaccggcagatcgagaag
cagctgacaggctggaagccttcgctggtgcaggacaccgtgcagaaaaaggtccagaag
ctcttgaaaacaaaggccaaggagctgccgaagtccaaggcgaagaaaccagccgccgcc
aaacagggcggcaacgtcatcaatatcatggatgcgttgaaaaagagccttaaagcctaa
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