KEGG   Agrobacterium larrymoorei: CFBP5473_19885
Entry
CFBP5473_19885    CDS       T06268                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
alf  Agrobacterium larrymoorei
Pathway
alf02020  Two-component system
Brite
KEGG Orthology (KO) [BR:alf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CFBP5473_19885
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:alf02022]
    CFBP5473_19885
Two-component system [BR:alf02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   CFBP5473_19885
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 AAA_5 HTH_8 AAA_2 FleQ AAA_16 Mg_chelatase RTP1_C2 AAA DUF7261 T2SSE McdB_C AAA_7
Other DBs
NCBI-ProteinID: QCJ00190
UniProt: A0A4D7DZ40
LinkDB
Position
linear:1215273..1216634
AA seq 453 aa
MTTSGTIFLVDDDSQLRKAMRQTLELEGMTVTAFPKAELALEALEQDFDGVIITDVRMPG
MDGLQFFERVRKIDADLPVILITGHGDVPMAVAALQSGAYDFIAKPFPAERMVESARRAL
EKRKLIMENRALRRAAEHAQDDLPLLGQTPAMERLRNTLRHIADTDVDVLVAGETGSGKE
VVATALHRWSKRRSAANFVALNCGALPETVIESELFGHEAGAFTGAQKKRIGRIEHSSGG
TLFLDEIESMPPAVQVKMLRVLEMREVSPVGSNEERPVDIRVVAAAKVDLGDPEQRKDFR
EDLYYRLNVVTLSIPPLRERRADIPLLFSHFVNKASSRFGMPVPQIGASISRHLNDHDWP
GNVRELGHFAERVVLGLEAGPSTAPVSVSGPAVAGTLAERMDRTEADIIREALEKHEGDV
ANTIATLGIARKTFYDKLQRHNISRSDYVPKGA
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgacgacgagcggaacgatctttctggtggatgacgactcgcagctgcgcaaggccatg
cgccaaacgctggagctggagggcatgacggtaacggcgttcccgaaggccgagcttgcg
ttggaagcgctggagcaggatttcgacggtgtcatcattaccgatgtccgtatgccgggc
atggacggtcttcagtttttcgagcgcgtgcgcaagatcgatgccgatctgcccgtcatc
ctcatcaccgggcatggcgatgttccaatggccgtcgcggcacttcagagcggcgcttac
gatttcatcgccaagccatttcccgctgaacgcatggtggaaagcgcacgccgtgccttg
gaaaagcgcaagcttatcatggaaaaccgtgcgcttcggcgtgcagccgaacatgcgcag
gatgatttgcccctgcttggccagacgcccgccatggaacggctgcgcaacacgctgcgc
cacattgccgatacggatgtggatgtgctggtggcgggcgaaaccggcagcggcaaggaa
gtggtggcgacagcgctacaccgctggagcaagcgccgctcagcggcaaatttcgttgcc
ctgaattgtggcgcgctgccggaaaccgtgatcgaaagcgagcttttcggccacgaggcg
ggtgccttcaccggcgcgcagaagaagcgcatcgggcgcatagaacattccagcggcggc
acgttgtttctcgatgaaatcgaaagcatgccgcctgccgtgcaggtaaaaatgctgcgc
gtgctggaaatgcgtgaagtctcgcctgtcggctccaatgaggagcgccccgtcgatatt
cgcgtcgtcgctgccgccaaggtcgatcttggagacccggagcagcgcaaggattttcgc
gaagacctctattaccgcctgaacgtggtgacactctcgattccgccattgagagagcgt
cgggcggatattccgcttctgttttcgcacttcgtcaacaaggcgtccagccggttcgga
atgccggtgccgcagatcggcgcaagcatttcccgccatctcaacgatcatgactggccg
ggcaatgtgcgcgaactcgggcattttgccgagcgtgtggtgttggggcttgaggccggg
ccttccacggcacccgtttccgtctccggtcccgctgtcgcgggcacgcttgcggaacga
atggatcgcaccgaggccgatattattcgcgaggcattggaaaagcacgagggcgatgtc
gccaacaccatcgcgacactcggcattgcccgcaagactttttacgacaagctgcaacgc
cataatatcagccgctccgactatgttcccaagggagcatga

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