Agrobacterium larrymoorei: CFBP5473_20680
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Entry
CFBP5473_20680 CDS
T06268
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
alf
Agrobacterium larrymoorei
Pathway
alf00260
Glycine, serine and threonine metabolism
alf00460
Cyanoamino acid metabolism
alf00630
Glyoxylate and dicarboxylate metabolism
alf00670
One carbon pool by folate
alf00680
Methane metabolism
alf01100
Metabolic pathways
alf01110
Biosynthesis of secondary metabolites
alf01120
Microbial metabolism in diverse environments
alf01200
Carbon metabolism
alf01230
Biosynthesis of amino acids
alf01240
Biosynthesis of cofactors
alf04981
Folate transport and metabolism
Module
alf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CFBP5473_20680
09102 Energy metabolism
00680 Methane metabolism
CFBP5473_20680
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFBP5473_20680
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CFBP5473_20680
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CFBP5473_20680
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CFBP5473_20680
Enzymes [BR:
alf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CFBP5473_20680
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QCJ00339
UniProt:
A0A4D7DV31
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All DBs
Position
linear:1393379..1394668
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AA seq
429 aa
AA seq
DB search
MSNTDAFFSKPLAEIDPDIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYA
EGYPGKRYYGGCQFVDIAEELAIDRAKKLFGVNFANVQPNSGSQMNQAVFLALLQPGDTF
MGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVERKAKEHKPKLILAGGT
AYSRVWDWKRFREIADEVGAYLMVDMAHIAGLVAGDQHPSPFPHAHVATTTTHKSLRGPR
GGMILTNDEDLAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALKPEFKDYAAQIVKNAKV
LSETLIEGGVDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYITCNKNGIPFDPEKPF
VTSGIRLGTPAGTTRGFKEAEFREIGKLIVEVLDGLKVANSDEGNAAVEAAVREKVVALT
DRFPMYPYM
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacagatgccttcttctccaagccgcttgccgaaatcgatccggatatcttt
ggcgcgatcgagaaggagcttggtcgccagcgccacgaaatcgagttgatcgcctcggaa
aacatcgtctcgcgcgctgtgctcgaagcgcagggctccatcatgaccaacaagtacgcc
gaaggttatccgggcaagcgttattatggcggatgtcagttcgtggacatcgccgaggaa
ctggcaatcgaccgcgccaagaagctgttcggcgtcaacttcgccaacgttcagccgaat
tccggttcgcagatgaatcaggccgtcttcctcgcgctgcttcagccgggcgatacgttc
atgggtctcgacctgaattcgggaggtcacttgacccacggttcgccggtcaacatgtcc
ggtaagtggttcaacgtcgtttcctacggcgttcgcgaaggcgacaacctgctcgacatg
gacgaagtggagcgcaaggccaaggaacacaagccgaagctcattctggctggtggcacg
gcatattcgcgcgtttgggactggaagcgcttccgcgaaatcgcagatgaagtcggcgct
tacctcatggtcgacatggcccacattgccggtctggttgccggtgatcagcatccctcg
ccattcccgcatgcacatgttgcgacgacgacgacgcacaaatccctgcgcggcccgcgc
ggcggcatgattttgaccaatgacgaagatctggcaaagaagttcaactctgccgtcttc
cctggccttcagggtggcccgttgatgcacgtcatcgccgccaaggccgttgccttcggt
gaagcgctgaagcctgagttcaaggactacgcagcccagatcgtcaagaacgcgaaggtt
ctgtccgagaccctgatcgaaggcggcgtggacgtcgtttccggcggtacggacaaccac
ctgatgctggtcgatcttcgcaagaagaacgcgacgggcaagcgcgcggaagcagcgctc
ggccgcgcctacatcacctgcaacaagaacggcattcctttcgacccggaaaagcctttt
gtgacgtccggtattcgcctaggtacgcctgctggcaccacgcgcggcttcaaggaagcc
gagttccgcgaaatcggcaagcttatcgtggaagtgctggacggtctgaaggttgccaat
tccgatgaaggcaatgctgccgttgaagctgcggttcgtgaaaaggtcgtcgcactgacg
gatcgtttcccgatgtacccgtacatgtaa
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