Agrobacterium larrymoorei: CFBP5473_20925
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Entry
CFBP5473_20925 CDS
T06268
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K23237
AraC family transcriptional regulator, melibiose operon regulatory protein
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alf03000
]
CFBP5473_20925
Transcription factors [BR:
alf03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CFBP5473_20925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_2
AraC_binding
AraC_binding_2
DUF6772
GPHR_N
Motif
Other DBs
NCBI-ProteinID:
QCJ00387
UniProt:
A0A4D7E2D1
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All DBs
Position
linear:1458646..1459557
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AA seq
303 aa
AA seq
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MQNLRPVPQDESVPVHPDHDPRHPLVIFGDHRFCAGEASLVQRMAGPHMHSQIELNFVLE
GNMTYWFDGRELTLDKGRLCLFWGMIPHQVIERAEGTRFVCLYVPMSFFLGLANLTRFRD
AVFRGAMIEALELRSYDHEIFERWRQELLSGDEGLIEIVRNELTARVLRIERDGWRDLRE
EGSAIASLGVHESERIEHVERMLRYIAEHALEDISADDVGADVGLHPNYAMSVFKRAVGL
TINQAIIRHRLDTAQSLLIATDLSITDVAFESGFGSVSRFYQAFTDRFGLQPKKYRVAMR
SKV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatctccgcccggttccgcaagatgaatcggtaccggttcatccagatcacgat
ccacgccacccgctggtcattttcggagatcatcgtttttgtgcaggtgaagcctcgctc
gttcagcgcatggctgggccccacatgcacagccagatcgaattgaatttcgttctggaa
ggcaacatgacctactggttcgatggccgcgagttgacgctggacaaggggcggctttgc
ctcttctggggcatgataccgcatcaggtcatcgagcgtgctgaaggcacgcgtttcgtc
tgtctctatgtgccgatgtccttctttctggggctcgccaatctcacccgcttccgcgac
gcagtttttcgcggtgccatgatcgaagcgctcgagttgcgctcctatgatcacgaaatc
ttcgagcgctggcgtcaggaacttctatccggtgacgaaggactcattgaaatcgtgcgc
aacgaactcactgcccgtgtgctgcgcatagagcgtgacggctggcgggatttgcgtgag
gaggggtccgcaattgccagccttggcgttcacgaaagcgaacgcatcgaacatgtcgag
cggatgttgcgctatattgcggagcatgccctggaagatatttcggcagatgatgtgggc
gccgacgtcggacttcacccgaactatgcaatgtccgtcttcaaacgcgcggtgggattg
acgatcaaccaggcgatcattcgccatcggctcgataccgcccaatccctgttgatcgcg
accgatctctccatcaccgatgtcgccttcgaatcgggcttcggctccgtttcccgcttc
tatcaggcctttaccgaccgtttcggccttcagccgaagaaataccgcgtcgctatgcga
agcaaggtttaa
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