Agrobacterium larrymoorei: CFBP5473_22145
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Entry
CFBP5473_22145 CDS
T06268
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
alf
Agrobacterium larrymoorei
Pathway
alf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFBP5473_22145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alf03400
]
CFBP5473_22145
DNA repair and recombination proteins [BR:
alf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CFBP5473_22145
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QCJ00849
UniProt:
A0A4D7DX36
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All DBs
Position
pAlCFBP5473:221041..221796
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AA seq
251 aa
AA seq
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MVEARVRVIDLETGGNGPNDVCEIGWQDVVIDQTGIWQVTDERGALFVNPGRPISPDTMA
IHHILDAQVADAPFWKEIASTVLRPPGRIDALAAHRAAFEQRYCTPRFTGGTPWICTWKC
ALRVWPQLPRFSNQMLRYQRMPTGLVHEIGLPAHRAMPDAYVTAHHLRDMLNKTSLEDCL
AWSTEPGLLPRVPAGPDRGKPWDRITIEALQAFVADRDVDVRFSAQTELARRIEDKPSQN
AEPAQGTLGFE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgaagccagggtacgtgtcatcgacctcgaaacaggcggcaacggcccgaatgac
gtttgcgagatcggctggcaggatgtcgtgatcgaccaaaccggaatatggcaggtcacc
gatgaacgcggggcgctgttcgtaaatcctggccgccccatctcacccgacaccatggcg
atccatcatatcctagatgcccaagtagcggatgctcccttctggaaggaaatagcatct
acggttcttcgtccacccggccgcatcgacgccttggcagctcatcgagccgccttcgag
caacgttactgcacgcctcgatttacaggtggaacaccctggatctgcacctggaaatgt
gcgctgcgtgtctggccgcagcttcctcggttttccaaccagatgctgcgttatcagcga
atgcccaccgggctggtacatgaaattggcctcccagcgcatagggcgatgcctgacgcc
tacgtcacggctcatcatctccgcgacatgttgaacaaaacctcgcttgaggactgcctg
gcatggagcactgaaccaggtcttttgcctcgcgtccccgccggaccagatcgaggaaaa
ccctgggatcgcatcaccattgaggcgctgcaggcgttcgttgcagatcgggatgtcgac
gttcgcttcagtgcacagaccgaactggctcgacggattgaggacaagccatctcagaat
gcggaaccggcgcaagggacgcttgggttcgaatga
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