KEGG   Agrobacterium larrymoorei: CFBP5473_22240
Entry
CFBP5473_22240    CDS       T06268                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
alf  Agrobacterium larrymoorei
Pathway
alf03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:alf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CFBP5473_22240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alf03400]
    CFBP5473_22240
DNA repair and recombination proteins [BR:alf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CFBP5473_22240
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QCJ00714
UniProt: A0A4D7DU02
LinkDB
Position
pAlCFBP5473:234866..235675
AA seq 269 aa
MAVRPYWKGHLKLSLVNCAVQMMPATSESEKVRFHTLNRATQNRVVSHYVDSVTGKDVKE
ENEVKGYARGENDYIILEHDELENVALDSTCTIDITTFTQRDTIEWIWLDTPYYLSPSEK
VAQEAFAVIRDAMASQGMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDSYF
DSIADEKPDADMMPLIQKLIKKQTKPWDAKMVIDPVQDRLLDIIKAKKKQQKKPTRAKAK
VPSSPSKPSNVINIMDALKKSVAAETRAK
NT seq 810 nt   +upstreamnt  +downstreamnt
atggctgttcgcccttattggaaaggccacctgaaactttcccttgtcaactgcgccgtc
cagatgatgccggcgacgtcggagagcgagaaggttcgcttccacactctgaaccgtgcc
acccagaaccgggtggtcagccactatgtagattccgtcacgggcaaggacgtgaaagag
gagaacgaggtcaagggttatgcgcgcggcgaaaacgactacatcatccttgaacatgac
gagctagagaatgtcgccctggacagcacctgcacaatcgacataacgaccttcacgcaa
cgagacacgatcgagtggatttggctcgataccccctactacctgtctccgagcgaaaaa
gtggcacaggaggctttcgccgtgatccgcgacgccatggcttcgcaaggtatggtcggt
atttcccgactggtaatctcgcgccgggaacgcgccgtcatgctcgaacctcgcggcaag
ggaatagtcctgtggacgctgcgttatggcgatgaggtacgtgacgaagacagctacttt
gacagtatcgccgatgagaaaccagacgccgacatgatgcctctcattcagaagctcatc
aaaaagcagacgaagccttgggacgcgaagatggtcatagatcctgtccaggatcgtctg
ctcgacatcatcaaggcgaagaagaaacagcagaaaaagccgactcgtgccaaggcaaag
gtgccttcgtcgccttccaaaccaagcaatgtcatcaacatcatggacgcactgaagaag
tcggtcgccgcagaaacacgggcaaaatag

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