KEGG   Agrobacterium larrymoorei: CFBP5473_23345
Entry
CFBP5473_23345    CDS       T06268                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
alf  Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:alf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alf03032]
    CFBP5473_23345
   03036 Chromosome and associated proteins [BR:alf03036]
    CFBP5473_23345
   03400 DNA repair and recombination proteins [BR:alf03400]
    CFBP5473_23345
DNA replication proteins [BR:alf03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CFBP5473_23345
Chromosome and associated proteins [BR:alf03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CFBP5473_23345
DNA repair and recombination proteins [BR:alf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CFBP5473_23345
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG Glycos_trans_3N HU-DNA_bdg TASL
Other DBs
NCBI-ProteinID: QCJ00931
UniProt: A0A4D7E6E6
LinkDB
Position
pTiCFBP5473:complement(86533..86811)
AA seq 92 aa
MTTTNEIADKIATEQNLTKAQAKTIVESVFKQITDAALAGAETSIPSFGKFKPKDTPERE
GRNPATGATIKIAASKKLTFTPGKAVKDALNG
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaccacaaccaatgaaatcgccgacaagatcgcaaccgaacagaacctgaccaaggcg
caggccaagacgattgtcgagagcgtgttcaagcagatcacagacgcggcgcttgctggc
gcagagacgtcgatcccctcgttcggaaagttcaagccgaaggacacgccggaacgtgaa
ggccgtaacccggcaacaggcgcaacgatcaagatcgccgcttcgaaaaagctgacgttc
acgcctggcaaggcggtcaaggacgcactgaacggctga

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