Agrobacterium larrymoorei: CFBP5473_24215
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Entry
CFBP5473_24215 CDS
T06268
Name
(GenBank) IS21 family transposase
Organism
alf
Agrobacterium larrymoorei
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
Sigma70_r4_2
HTH_23
HTH_38
rve
HTH_11
HTH_24
GerE
HTH_40
MarR_2
Sigma70_r4
HTH_29
HTH_5
HTH_28
HTH_Tnp_ISL3
HTH_31
HTH_36
HTH_7
HTH_19
HTH_20
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QCJ01058
UniProt:
A0A4D7E0L7
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Position
pTiCFBP5473:260072..261625
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AA seq
517 aa
AA seq
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MARRKQVRLTDVKDIRSILRLTHEQGLSVRAISERLKISKTTISTYLLRAREAGLTGWPL
PPGLDDDGILQRRLFHRRGRPPQDMHEPDWGKIASELKRKGVTLTLLWQEYRERHPNGYG
YTWFCERFAAFEQRASATFRNRHTAGAAMQTDYAGQTVPVIDPVTGEIRLAQIFVAVLPA
SLYTFAYASFTQRLPDWIEGQQLALGFFGGVTKAIVCDNLKAGVAKPLWFEPTINATFAA
FAEHYDTTILPTRPKRPKDKAKVEGSVLIVERWILARLRNDRFFSLVDLNVRISQLLDDL
NSRPMRRVGKSRRQLFEEIEQDALAPLPATPFEYSEWKSAKVHPDYHVEVDKAFYSVPHR
LIGRQVDVRLTSRIVEILHDHQRVASHRRTSQRGGHVTVNEHMPKTHQHYANTTPASLIK
QAAKIGRNAAILIERLMRDRPHPQQGYRAAQGVLSLARRYGPERLEAACDRALTINALSY
SSVSTILKSGLDQAPPGAEPVKPTPVHGNIRGSSYYQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacggaagcaggtgagacttactgacgtgaaggacattcgatcgatattgcga
ctgacgcacgaacaggggctttcggttcgtgcgatatcggaacggctgaagatcagcaaa
acgaccatttcgacctacctgctgcgggcgcgtgaggccgggctgacgggctggccgtta
ccgcctgggctggacgatgatggcattctgcagcgccgcctgttccatcgtcgcggccgt
ccgccccaggacatgcacgaacccgactggggcaagatcgccagtgaattgaagcggaag
ggcgtgacactgacgctgttgtggcaggaatatcgcgaacggcaccccaacggttacgga
tacacgtggttctgcgagcggtttgccgctttcgagcagcgcgccagcgccaccttccgc
aatcgccacactgccggcgcggcgatgcagaccgactacgccggccaaaccgtcccggtg
atcgatccggtgacgggcgaaatccggctggcgcagattttcgtcgcggttctgccagcc
tccttgtacaccttcgcctatgcaagcttcactcaacggttgcccgactggatcgagggt
cagcagctggcgctgggtttcttcggtggcgtgacgaaagccatcgtctgcgacaacctc
aaggccggcgttgccaagcccttgtggttcgagccgaccatcaacgccacttttgcggca
ttcgccgagcattacgacacgacgatcctgccgacccgtccgaaacggccgaaggacaag
gccaaggtcgaaggcagcgttctcatcgtcgagcgctggatcctggcgcggctgagaaac
gaccgtttcttcagccttgtcgatctcaacgtgcggatcagccagcttctcgacgatctc
aatagccggccgatgcgccgggttggcaaatcccgccggcagctcttcgaggagatcgag
caagacgcgcttgcgcccttgccggcaacgccattcgaatattccgaatggaagtcggca
aaggttcatcccgactaccatgtcgaggtcgacaaggccttctattccgtgccgcaccgc
ctgatcggccgccaggtcgatgtccggcttacaagccggatcgtcgagatcctccatgat
caccaacgtgtcgccagccaccgccggacgtcgcagcggggcggtcatgtcaccgtcaac
gagcatatgccgaagacacatcagcattatgccaacacgacgcctgcgagcctcatcaag
caagctgcaaagattggccgcaacgctgcaatcctgatcgagcggctgatgcgcgataga
cctcatcctcagcagggataccgcgccgctcaaggcgttctatcgctcgcgcgccggtac
ggccccgagcgtctggaagcggcgtgcgatcgggcactgacgatcaatgcgctcagctat
tcctccgtcagcaccatcctcaaatccggtctcgatcaggccccgcctggtgctgagcca
gtcaagcccaccccggtgcatggcaacatccgcggcagctcctattaccagtga
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