Aquicella lusitana: AQULUS_03650
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Entry
AQULUS_03650 CDS
T06205
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
alg
Aquicella lusitana
Brite
KEGG Orthology (KO) [BR:
alg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alg03032
]
AQULUS_03650 (topA)
03400 DNA repair and recombination proteins [BR:
alg03400
]
AQULUS_03650 (topA)
Enzymes [BR:
alg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AQULUS_03650 (topA)
DNA replication proteins [BR:
alg03032
]
Prokaryotic type
DNA Topoisomerases
AQULUS_03650 (topA)
DNA repair and recombination proteins [BR:
alg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AQULUS_03650 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Motif
Other DBs
NCBI-ProteinID:
VVC72651
LinkDB
All DBs
Position
1:384092..386389
Genome browser
AA seq
765 aa
AA seq
DB search
MTTNLVIVESPAKAKTIKKYLGPDFNIVASYGHVRDLLPKEGAVDPEHHFAMRYELIEKN
EKHVAAIVSAMKKADALYLATDPDREGEAISWHIYTILKDKKALGKKPVHRIVFHEITKS
AVNAAVQHPREISMDLVNAQQARRALDYLVGFNLSPLLWKKIRYGLSAGRVQSPALRMIV
EREEEIEKFVSQEYWDLESALEAEKKAFNAKLIIYEGEKLEQFSITNQEQAEAIKARLIK
EAKGKLRVAKVEKKQRKRNPASPFITSTLQQEAARKLGFAVQRTMRIAQQLYEGVEIDSG
SVGLITYMRTDSVNLAQDAITEIRDLIAERYGKENVPEEARIYKTKAKNAQEAHEAIRPT
SVHRLPESLKDFLSPEQFKLYDLIWKRTVASQMISATIDTMTLDMSAGSDQHQFRATGSV
VVDPGFMRVYQEGSDDKPEELDNEHLLPQLEEGDEVKLNDIICNQHFTEPPPRYSEATLI
KALEEYGIGRPSTYAAIVSTLQTREYVVLENKRFRPTDIGRIVNKFLTKYFTRYVDYLFT
AQLEDELDEVSRGEKAWVPLLEEFWDPFKHQVDNIAETVKRKDVTQEQLDESCPLCGKPL
SIRLGKRDRFIGCTGYPECTYTRAMEEQPGEASHDAELVEGRSCPDCGGALKIKHGRYGK
FIGCSNYPKCKHIESLNKPTDTGVECPECKQGKMVKRQSRKGRIFFSCSRYPDCKYAVWN
EPINQSCPKCAWPMLTVKKTKKRGTELVCPRQTCGYVEQVEEITK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgactacgaatcttgtcatcgttgaatcaccggcaaaagccaagacgataaagaagtat
ttgggtcccgattttaatatcgttgcctcgtatggacacgtgcgcgatttgctgcccaaa
gaaggcgctgttgatccagaacatcattttgccatgcgctatgagttgatagaaaaaaat
gaaaaacatgtggcagccattgtcagtgcgatgaaaaaagcggatgccttatatctggct
actgaccctgatcgcgaaggtgaagccatctcctggcatatctataccattctaaaagac
aagaaagcgctgggtaaaaaacccgtgcatcgcatcgtgttccacgaaattaccaagtca
gccgttaacgctgctgttcaacatccgcgtgaaatatccatggatctggtgaatgcgcag
caggcgcggcgtgcactggattatctggtgggattcaatttatctcccttgttgtggaaa
aaaatacggtatggactttccgccggccgggtacaaagccccgcattgcgtatgattgtg
gagcgcgaagaagagattgagaaattcgtttcgcaggaatattgggacctggaatcggcg
ctggaagcggaaaagaaagctttcaatgccaagctgattatttatgaaggcgaaaaactg
gagcagttttcgattacgaatcaggagcaggctgaagccattaaagcacgcctgattaaa
gaagcaaaaggtaagttgcgtgtcgcaaaagtagaaaagaaacaacgcaagcgcaatcct
gcctcgccttttattacttcgaccttgcagcaggaagccgcccgcaagctgggttttgcc
gtgcagcgtaccatgcgaattgcccagcagctttatgaaggtgtggaaattgattcaggc
tctgtcggtcttatcacttatatgcgtactgactccgttaacctggcgcaggatgccatc
actgaaattcgtgatctgattgccgagcgctatggcaaggagaatgtgccggaggaagca
cgcatttacaaaaccaaggccaaaaatgcacaggaagcgcatgaagccatacggccgacc
tcggtgcaccgtctgcccgaatcactcaaagactttttatcgcccgagcagtttaaattg
tatgacctgatctggaaacgcactgttgcatcgcaaatgatttccgccaccattgatacc
atgacccttgatatgagcgcaggtagcgaccagcaccagttccgcgcaacgggctctgtc
gtggtggatccgggctttatgcgcgtctatcaggaaggttcggatgacaaaccggaagag
ctcgacaatgagcatctcttgcctcagcttgaagaaggggatgaagttaaactgaatgat
atcatctgcaatcaacacttcacggaacccccgccgcgctattctgaagcgaccttgatc
aaggcgctggaagaatatggcatagggcgtccgtctacgtatgccgctattgtttctacc
ctgcagacacgtgaatatgtggtgttggaaaacaagcgttttcggcctacggatattggg
cgtattgtgaacaagtttctgacaaaatactttacccgctatgtggattatctatttacc
gctcagctcgaagatgaattagatgaagtatcacgcggggaaaaagcctgggtgccttta
ctggaagaattctgggatcctttcaaacaccaggtagacaatattgcagaaaccgtcaag
cgcaaagatgtgactcaggagcagcttgatgaatcctgtcctttgtgcggtaaaccgttg
tctatacgcttgggcaagcgggatcgctttattgggtgcacaggttatcctgagtgtact
tatacgcgcgcaatggaagagcagccaggtgaagcctcccatgatgctgaattagtagaa
ggtcgttcctgtcctgattgcggcggtgcgctcaaaattaagcatggcaggtatggcaaa
tttataggctgtagcaactatcccaaatgcaagcatattgaatcattgaacaagccaacg
gatacaggggtagagtgccctgaatgcaaacaaggcaaaatggtaaaaaggcagtcgcga
aaaggccgtatatttttctcctgttcccgttatccagactgtaaatatgccgtatggaat
gaacctattaatcaaagctgcccaaaatgtgcttggcccatgttaactgtcaagaaaacg
aagaaacgcggcacggaactggtttgcccgcgacagacgtgcggatacgtggagcaggtc
gaagagataactaagtaa
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