Aquicella lusitana: AQULUS_09270
Help
Entry
AQULUS_09270 CDS
T06205
Symbol
rne
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
alg
Aquicella lusitana
Pathway
alg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AQULUS_09270 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alg03019
]
AQULUS_09270 (rne)
03009 Ribosome biogenesis [BR:
alg03009
]
AQULUS_09270 (rne)
Enzymes [BR:
alg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AQULUS_09270 (rne)
Messenger RNA biogenesis [BR:
alg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AQULUS_09270 (rne)
Ribosome biogenesis [BR:
alg03009
]
Prokaryotic type
rRNA processing factors
AQULUS_09270 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
VVC73195
LinkDB
All DBs
Position
1:complement(988296..990644)
Genome browser
AA seq
782 aa
AA seq
DB search
MNRMLINATHKEEELRIALASGQYLYDLIIESTSREQKQSNIYKGKVTRIEPSLEAAFVD
YGEERHGFLPLKEVARACFKKSFVDSGRRPSITEVLEEGQELVVQVEKEERGNKGAALTT
FITLPGCYLVLMPNNPRAGGVSRRIEGDERDELHGILSSLQVPEGMGLIIRTAGGGRSLE
ELQWDLEILFRLWDVVQKAAQDRPAPFLIYQEGNAVIRALRDYLRKDIDEILIDHPDVYE
DVVNHLKLIRPDFVNRVKLYKDPTPLFTRFQIESQIESAFQRDVRLPSGGSIIIDHTEAL
VSIDINSAKSTKGGDIEETALMTNLEAANEIARQLRLRDIGGLIVIDFIDMTPIRNQREV
EDRLRKALIMDRARVQVGRISRFGLLEMSRQRLRPSLGESSRVTCPRCLGQGTIRGIESL
GLSVIRIIEEEALKENTAQVRTILPTEIAAYLLNEKRQAIIDIEKRQGVSIIVVPSNHLL
TPQYEVERIRLSDITEKDEKLASYKLAIKPEISSQITAPVQKTHQEPAIKSMPMEEMPAP
SGHFPPSAAASKEKGEPGLLKKLFTYLFEKKEEEPEAPVQEDRFKKHGRPMRPTGKRKGG
RHHHRGGRRDHRDRGRQGGGGYRNYEQRGETRHKDRETHEHKDQRETKDHQDFRDTRDQG
SRETREFSRTPDTRPDSSTNLPQVIEPQQHLPEEQRAKTPKNDIPTESSNIRPFEPVAKE
GSTQPGERAERRPRPRFKPHRHKHHHKGHAAKHDQGESPRHNLEGEDIYKTGGSGGRTEG
ED
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaatgttaattaatgcaactcataaagaagaagagttgcgaatcgcgcttgca
agtggccagtatctgtatgatctgattattgaatccacctcccgagaacagaaacaatcc
aatatttacaagggtaaagtgacacgcatcgagcccagcctcgaggcagcttttgtagac
tacggagaggaacgccatggcttcctgcccctcaaagaagtggccagggcctgtttcaag
aaaagctttgtcgacagcggcagacgcccttccattacagaagtgttggaagaaggccag
gagctcgttgtccaggtcgaaaaagaagagcgcggcaacaaaggcgctgcgctcaccacc
ttcattaccctcccaggctgctacctcgttctcatgcccaataacccacgcgcaggcggc
gtttcccgccgcatcgaaggggatgagcgagatgaactgcacggtatcctgagctcgctg
caagtgccggaaggcatgggtcttatcatccgcactgcggggggcggtaggtcgctagaa
gaattacagtgggatttggaaatcctgtttcgcctctgggacgtggtacagaaagctgcc
caagaccgccccgcgcctttccttatttatcaggaagggaatgccgttatccgggccctg
cgggactacttgcgcaaagatattgatgaaatccttattgaccatcctgatgtctatgaa
gacgtggtcaatcaccttaaactgatccgccccgacttcgtcaaccgcgtgaagctttat
aaggatcccacaccgctctttacccggttccagatcgaaagccagattgaatcagctttc
cagcgtgatgtgcgtctgccttctggcggctctattatcattgaccatactgaagcgctg
gtttcgattgatatcaactcggcaaaatcgaccaagggtggagatattgaagaaacagct
ctcatgactaatctggaagctgccaacgaaatcgcccggcaattacgcttgcgcgatatt
ggcggactcattgttatcgactttattgacatgacgcctattcgcaatcaacgcgaagta
gaagaccggttacgtaaggcgctaatcatggaccgtgcacgcgtccaagtgggcaggata
tcccgcttcggcttgctcgaaatgtcacgccagcggcttcggccatcgctgggtgaatcc
agccgtgttacctgcccgcgctgcctgggtcagggaaccatacgcggtatcgagtcatta
ggcttatctgtgatacgcattatcgaagaggaagcactcaaggaaaatacggcgcaggtc
cgcactattctgcctactgagattgctgcctatcttttgaatgaaaagcgccaggcgatt
atcgatattgaaaagcgccagggtgtatccatcatcgttgtacccagcaaccatctgtta
acgcctcaatatgaggtggaacggattcggctttctgacatcactgagaaagatgaaaaa
ctggcaagctacaagcttgccatcaagccagaaatttccagccagatcacagccccggta
caaaaaacccatcaggaaccggctatcaaaagcatgccgatggaagaaatgccagcaccc
tctggccacttcccgccttctgccgcagcttccaaagaaaagggcgagcccggtttattg
aaaaaactgttcacctacctctttgagaaaaaagaggaagaacctgaagcgccggttcaa
gaagatcgattcaagaaacacggcagacccatgcgtccaactgggaaacgcaaaggcgga
cgtcaccatcatcgaggaggacgcagagaccatcgtgaccgtggaagacaaggtggcggt
ggctacagaaattatgagcagcgcggtgaaaccagacacaaagaccgggaaactcatgaa
cacaaggatcaacgggaaaccaaagatcatcaggatttccgcgacacccgtgatcagggc
agccgggaaacacgtgaattctcccgcacgccggatacaagaccagacagcagcactaac
ctgccacaggttatcgaaccgcagcagcatttaccggaagaacagcgtgccaaaacgcca
aaaaatgatatccctactgaatcttccaatatcagaccttttgaacctgtagcaaaagaa
ggttcaacccagccgggcgaaagagctgaaagaagaccaagaccacgtttcaaaccgcat
cgccataagcatcatcataagggtcacgcggcgaaacatgatcaaggagaatcacctcga
cataacctcgaaggcgaagacatttataaaacgggtggcagtggcggccgtacggaagga
gaggattaa
DBGET
integrated database retrieval system
