Algoriphagus sp. NBT04N3: GYM62_00630
Help
Entry
GYM62_00630 CDS
T09623
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
algo03009
]
GYM62_00630 (rimO)
Enzymes [BR:
algo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GYM62_00630 (rimO)
Ribosome biogenesis [BR:
algo03009
]
Prokaryotic type
ribosomal protein modification factors
GYM62_00630 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
Tle3_C
Motif
Other DBs
NCBI-ProteinID:
QYH37386
LinkDB
All DBs
Position
126434..127744
Genome browser
AA seq
436 aa
AA seq
DB search
MKARTLKKDKVNIITMGCSKNLVDSEVLLTQLKGNGINASHESSSDDNNIIIINTCGFID
NAKQESIDTILQYVDAKEQGLVDKVYVTGCLSQRYKDDLEKEIPQVDAFFGTRDLPAILK
KFKADYKHELVGERLLTHSAHYAYMKISEGCDRPCSFCAIPLMRGGHVSRPIEELVKEAQ
HKAAQGTKELLLIAQDSTYYGLDLYKKRNLAELLRQLSDVEGIDWIRLHYAYPTGFPMDV
IEVMKERSNICNYLDIPLQHGSTDVLKAMRRGTTREKQEELIYKIREMIPEIAIRTTLIA
GHPGEGEKEFQEMVDFVERMKFERLGVFTYSHEENTHAFGMEDKLSQEEKQDRANHLMEV
QEQISYDLNQEKVGKTFKTLIDKKEGGYFVGRTEFDSVEVDNEVLIDASKHYCRVGDFVN
AKVIEATEFDLYAEVD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcgagaacattaaagaaagacaaagtcaatatcatcaccatgggttgctccaaa
aacctggtggattccgaagtgcttttaacccagttgaaaggaaatggaatcaatgccagc
cacgagtccagctcagatgataataatatcattatcattaatacctgtggatttatagac
aatgccaagcaagaatctatagataccattcttcaatacgtggatgccaaagaacagggc
ttggtggataaggtatatgtgaccggctgtctttctcagcgttacaaagacgatttggaa
aaggagattcctcaagtcgatgcattttttggaacacgggatttgcctgccattttgaag
aaattcaaagcagattacaagcatgaattggttggggagcgcctactaactcactcggca
cattatgcatatatgaaaatttccgagggttgtgaccgcccttgttctttttgtgcgatt
cctctgatgagaggtggacacgtttccagacctatagaagaattggtgaaagaagctcag
cacaaggctgcccaaggaaccaaggagttgttgttgattgctcaggattcgacctattac
ggattggacttgtataaaaagcgaaatctggccgaactcttaagacagctttcggacgtg
gaaggaatcgattggattcgtctgcattatgcatacccaaccggctttccgatggatgtg
attgaagtgatgaaggagcgatccaatatttgtaattacttggatattcctttgcagcat
ggttctacagatgtattgaaagccatgcgacgtggaactacccgagaaaagcaagaggaa
ttgatctataaaattcgcgaaatgattcctgaaatagccatccgtactaccctaatagct
gggcatcctggcgaaggtgaaaaagaatttcaagagatggtggactttgtggagcgaatg
aaatttgagcgattgggagtatttacctattcccatgaagaaaatactcatgcttttggt
atggaggacaaactttctcaggaggaaaaacaggatagagcgaatcacttgatggaagta
caggagcaaatttcctatgacttgaatcaggagaaagttgggaagaccttcaagacctta
atcgataaaaaagaaggaggttactttgtaggccgaacagaatttgactctgtggaggta
gataatgaagtactaatagacgcttccaagcattattgtagagtaggtgactttgtcaat
gccaaagtaattgaggcaacggaatttgatttgtatgcggaggtggactag
DBGET
integrated database retrieval system
