Algoriphagus sp. NBT04N3: GYM62_00940
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Entry
GYM62_00940 CDS
T09623
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GYM62_00940
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
algo01007
]
GYM62_00940
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
algo03016
]
GYM62_00940
Enzymes [BR:
algo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
GYM62_00940
Amino acid related enzymes [BR:
algo01007
]
Aminoacyl-tRNA synthetase
Class II (U)
GYM62_00940
Transfer RNA biogenesis [BR:
algo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GYM62_00940
Prokaryotic type
GYM62_00940
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
QYH37442
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Position
186720..189134
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AA seq
804 aa
AA seq
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MRISINRLKKYIALTQSPEEIAALLTQSGLEVEGIEEFVSIPGGLEGIVIGEVLTCIKHP
DADKLSLTTVDIGADEPSQIVCGAPNVAAGQKVLVATVGATLYPTEGDAFTIKKAKIRGQ
ASEGMICAEDELGIGTSHAGIMVLDTDLPNGTPASQIIPVTHDHILEIGLTPNRADAASH
LGVARDLKALLGKELCIDSSPEIKKEAEGPKISVNVENSTDCPRYAGVTITGLKVGPSPQ
WLQDFLRALDLEPINNVVDITNYILHDLGQPLHAFDAAQISEGKVIVKKLPKDSKFVTLD
EKERKLSGEELMICDSKGGMCIAGIFGGIGSGVTENTTSIFLESAYFSPDVIRKGAQYHG
LKTDASFRFERGTDPNMPVYALKQAVKLLQEVAGGKVASDIVDIYPQPVADFEIEVEYGH
INRLIGKKIAPSEVKSILESLDIQVQNETEQGFKAIVKPYRVDVTREADIIEEILRIYGF
QQVALSENLRTDYLAEHPAKDLNKLQYRLSEILSGQGYFEIITNSLTKPSYAEKSGFLDA
SQNVEIYNKLSEDFGVMRQTLLFSGLEVLAHNINRRQTDVKVFEFGTVYQKGETGYEEGK
RLAIFHTGNKSAESWLEEAKPFGFADVYSTVERILEKLGIQVGDVSMIESQPFTYGLRLM
LGQKELGIIGLVDEKMLKLAEVRQEVWFAELNWDLICKKASGLKRYQEISKFPEVRRDLS
LVIDKTVNYDQVKSVALKAGGKLLQRIGVFDVYQGDKIESGKKAYALSFYLQDQENTLTD
KVIDKTMSKLIQAFQNEVGAVIRS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagaatttcaatcaatcgattaaaaaaatacattgctttaacccaatcaccggaggaa
attgcagcacttttgacccaatccggattggaagtagaagggatcgaagagtttgtatcc
atccccggtggcctcgaagggatcgtaataggagaggtactgacttgtatcaagcatccg
gatgctgataaactgagtttgaccacagtggatatcggagcggacgagccctcgcaaatt
gtatgtggagctcccaatgtggcagctggccagaaagtactggttgccactgtaggtgcc
actctttacccaactgaaggtgatgcattcaccatcaaaaaggccaaaattagaggtcag
gcttcagaaggaatgatttgcgctgaagatgaattgggaataggaaccagccatgcaggg
attatggtcttagatacggacttgcctaatggcacacctgcatctcaaatcatccctgtc
acccatgaccatattcttgaaatagggcttacacccaatagagccgatgcggcctctcat
ttgggtgttgcaagagatctgaaagcacttttaggcaaagaattatgcattgactccagc
cctgaaatcaaaaaggaggctgaaggaccaaaaatttctgtcaacgtagaaaattcaaca
gattgtccgcgctatgccggtgttaccatcacaggtttgaaagtaggtccttctcctcaa
tggttacaggatttcttgcgtgctttagatttggaacctattaataatgtggttgatatc
acgaattacattctgcatgacttgggacagccccttcatgcctttgatgcagctcagatt
tctgaggggaaagtgattgtcaaaaagcttcctaaggatagcaaatttgtgactttggat
gaaaaagagcgtaaactttccggagaggaattgatgatttgtgattcaaaaggagggatg
tgtattgctggaatttttggaggaattggttcaggtgtaacagaaaatacaacttccatt
ttcttggaatccgcttatttttcaccggatgtgatccgaaagggagcgcaatatcatggt
ttaaaaacggatgcttctttccgctttgaaagaggaactgatcccaatatgccggtttat
gcattgaagcaggcggtgaaattattgcaggaagtcgcagggggaaaagtggcttctgac
atcgttgatatctatccacagccagttgcagattttgaaatagaagtggagtatggtcat
atcaatcgtctgattggtaaaaaaatagccccatctgaagtgaaatctattttggagtct
ttggatatccaagtacaaaatgagactgagcagggattcaaggccattgtaaaaccttat
cgggtggatgttacccgtgaggcagatatcattgaggagattttgcgaatttatggtttc
caacaagtagcgctttcagaaaatttacgaacagattatttggccgagcatccagctaag
gacctaaataagctgcaatatcgattatcagaaattctttcgggtcaaggatattttgag
attattactaatagtttgaccaagccttcctatgctgagaagtctggattcttggatgct
tcccaaaatgtagaaatctacaacaagcttagtgaagactttggtgtgatgcgtcaaacg
ctactttttagcggtttggaagtattggctcataacatcaatcgacgtcagacagatgtc
aaggtatttgaatttggcacagtgtatcaaaaaggtgaaactggctacgaggaaggcaag
cgattggcaattttccataccggaaacaaatctgctgaaagttggctggaagaggccaag
ccttttggttttgcggatgtttacagcaccgttgagcgaattttggagaaactaggaatc
caggtcggtgatgtttccatgatcgagtctcagcccttcacttatgggcttcgcctgatg
ttgggtcaaaaggagttgggtataatcggcctggtagatgaaaaaatgctcaaattagcc
gaggtaagacaggaggtctggtttgccgaattgaattgggacttgatctgtaagaaagca
agtggtctgaagcgatatcaggaaatctccaaatttccagaagtaaggagagatttatct
ttggtgatcgataaaaccgtgaattatgatcaggtaaaatctgtagctttaaaggcggga
ggaaaattattgcagcgaattggcgtttttgatgtctaccagggtgataagattgagtct
ggtaaaaaggcttatgcattgagtttttacctgcaggatcaggaaaatacactaacggat
aaggttattgataaaacaatgagtaaattgattcaagcctttcaaaatgaggtgggagct
gtaatacgaagctga
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