Algoriphagus sp. NBT04N3: GYM62_03140
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Entry
GYM62_03140 CDS
T09623
Name
(GenBank) PAS domain S-box protein
Organism
algo
Algoriphagus sp. NBT04N3
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
PAS
PAS_4
PAS_8
HATPase_c
HisKA
PAS_11
PAS_12
HATPase_c_5
Diguanyl_cycl_sensor
DUF7090
DUF4398
Motif
Other DBs
NCBI-ProteinID:
QYH37840
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Position
complement(712011..715877)
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AA seq
1288 aa
AA seq
DB search
MSPAKKNHPTQSGSQKTSSEKSDPKNTKFVDAIENINGLGIWKLNIQTGENDWSEEFFKI
CGLNPKNTIPSTELRWSIIHPEDREEAKKAFENSITTGNPYKLEKRITLPNGDIKHIESE
GRVSFDEHGKPLYLIGTFKDLTDLRANENQLTQTTDELDSILENSIDLIFIFDKDGVISK
ISNSVVETLGYPKEDIIGREYTEFVYPADLQKTREASDQIRDGVKIRNFKNRYLNSEGKL
IHFNWSASLKKGTDDVLAIARDITELEEIKKSRKQDNFRIQTILNTSPDLIWSLDRDFKL
VSANTAFKQIIKESINWEIKEGDDLLSIEKYGPDYIEIWKNHYEKAFSGKKIKVEDVVKT
QNSETPCIYETKINPIKIKGEVVGLACFSRNITEKRNAAEKIKQLNKRLLKGQEMSKIGY
WESNLITNQIFWSDEMYRIWEVKKSDSDLNFDFFFESIHPEDKKNFLYHRNRAITKEKNL
DVVYRIISQKGKVKYIHELGELVEDDKNGEQVFRGTAQEITKEKETEIQLRDRNFFIEST
LNNIPLGIAVNKISDGEATYMNKAFEEVYGWPKEEIVSVESFFQKVYPNPEYREWIQKRI
MDDILSGDPERMTWRGIVVTTKDGKEKIVNAKNIPVPDLNLMISTVADDTERYWAEEALK
ISNDRFKLVSEAVSDAIWDWDLEKSTIFWGRGYHRLFGYPESKNQVDESAWLESIHPDDY
KDIWHSILEARKNPKQKFWSGEYRFKRFDGSYAYVDEKTIIIRNSKGDPVRMVGALQDIT
KEKERENHLKLLESVVTNTTDAILITNADPDEEGYKIIYANQSFVNMTGYSQDEILGKTP
KILQGNDTDLEKMKRFGKELREWKSTSVEVINYKKDGTPFWVNIVVVPVADESGWYTHWV
GIQRDITEKKQREQELELMNERFKMVSEATNDAIWDWDVKNGNHFWGEGFSKLFGIDLSK
KKNDTEEWEKRIHPEDREKVLAHLQSVFENPNQNDFQIEYRFQKNKTEYAYVLDSGTVIR
DQEGKPTRLVGAVQDISAQKDYENSLKQLNETLEKANKELELSNQELEQFAYVASHDLQE
PLRMISSFLGLIEKRYDTVLDEKGKKYIHFAVEGAKRMRQIILDLLEFSKLDNFQESKIW
IESSEILNISKLFLKKTIQKKDPIFHISQLPKVFGHKSTLVQLFQNLISNAIKYQPEGQK
PEIWISAKEKKTEWEFAFKDNGIGIEKDYVEKIFIIFQRLHVQESYSGTGIGLAISKKIV
DMHGGKIWVNSTPSKGSTFYFTIQKPSE
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgagccctgcaaaaaaaaatcaccccacccaatctggctctcagaaaacttcttctgag
aaatctgatccaaaaaacacaaagtttgtagatgctattgaaaatatcaacgggctaggg
atttggaaattaaatatccaaaccggagaaaatgattggtctgaggaatttttcaagatt
tgcggactcaatccgaaaaatacaattcccagcacagaacttagatggtccattattcat
cctgaggaccgagaagaagcaaaaaaagcttttgaaaattcaattaccacgggaaatccc
tacaagctagaaaagcggattaccctaccaaatggggatatcaaacacattgaatccgaa
ggtagggttagttttgacgaacatggtaagcctctttacttgattggtacattcaaggat
ctcaccgatttgagggccaatgaaaatcaattaactcaaaccacagacgaattagatagc
atcctagagaattcgattgatttgatttttattttcgacaaggatggagtgatatcaaag
atctccaatagtgtcgttgaaaccttgggttatcccaaagaagatattattgggagggag
tatacggaatttgtttatccggcagatttacaaaaaacaagggaagcaagtgatcaaatc
agagatggggttaagattagaaatttcaaaaaccgttatttgaattcagaaggaaagctg
attcattttaattggtctgcttccctgaaaaagggcactgatgatgttttggcaattgcc
cgagatattacagagttggaagaaattaaaaaatccaggaagcaggataattttcgaatt
caaaccatactcaatacctcccccgatttaatctggagtttagatagagactttaaattg
gtcagtgctaacacagcttttaaacaaatcatcaaagagagtataaactgggaaatcaag
gaaggagacgatctcctttcaattgagaaatatggtccagattacattgaaatctggaaa
aaccactatgaaaaagcattttctggaaaaaaaataaaagttgaggatgtcgtaaaaacc
caaaattcggagactccttgcatctacgaaaccaaaatcaatcccatcaaaatcaagggt
gaagtggttggattagcctgcttttcaagaaatattactgaaaaacgaaatgcagctgaa
aaaatcaagcagctaaacaagcgcctattaaaaggacaggaaatgtccaaaataggatat
tgggaaagtaatttgattaccaaccagattttttggtcagatgaaatgtatagaatctgg
gaagtaaaaaaatctgacagcgatctcaattttgattttttctttgaaagcattcatccc
gaggacaagaagaatttcctttaccatagaaatagagcaattacaaaagagaagaatcta
gacgtagtctatagaattatttcccaaaaaggcaaggtgaaatacatccacgaattagga
gaacttgtcgaagatgataaaaatggagaacaggtatttagaggaactgctcaggaaatc
accaaggaaaaagaaactgaaatccaactaagagatagaaattttttcatcgaatcaacc
cttaataatatccctttgggtattgccgtcaataagattagcgatggtgaggccacttat
atgaacaaggcttttgaagaagtatatggatggccaaaagaagagattgtcagtgtagaa
tcctttttccaaaaagtttatcccaatcctgaatatagagagtggattcaaaaaaggatt
atggatgatattttaagtggagatcctgaaagaatgacatggagagggattgtcgtaacc
accaaagatggaaaagagaaaatagtcaatgcaaaaaacatcccggttcctgatttgaat
ttgatgatctctacggtcgcagatgacacagaaagatattgggctgaggaagctttaaaa
ataagtaatgatagatttaagttagtatctgaagccgtttctgatgctatctgggattgg
gacctagaaaaaagcaccattttctggggtagagggtatcatcgcttatttggatatcct
gaatcaaaaaatcaagtggatgaaagcgcatggttggaaagtatacacccagatgattat
aaagacatttggcatagtatcctagaggctagaaaaaatcctaagcaaaagttctggtct
ggtgaatatagatttaaaaggtttgatggatcctatgcttatgttgatgaaaaaaccatc
atcatcagaaactccaagggagatccggttagaatggtgggtgccttacaagatatcact
aaagaaaaagaacgtgaaaatcatctgaaattattggagtcagtggtaacaaataccaca
gatgcaattcttatcaccaatgctgacccagatgaagaagggtacaaaattatatacgca
aatcaatcatttgtaaatatgacggggtattcccaagatgaaatcttaggaaaaacacct
aaaattctccaagggaatgatactgatctggagaaaatgaaaagattcggaaaggagctt
agagaatggaagagtacttccgtcgaagtaattaattataagaaagacggcactccattt
tgggtgaatatagtggttgtccctgtcgccgatgaatccggatggtacacccactgggta
ggcatccaaagagacattacggaaaagaaacaaagagaacaggagctcgaattaatgaac
gagcgattcaaaatggtttctgaggctaccaatgatgctatttgggattgggatgtgaaa
aatgggaatcatttctggggcgagggtttttccaaattatttggaatagatctcagcaaa
aagaaaaatgataccgaagaatgggaaaagcgcatccaccctgaagatcgagagaaagta
ttggctcatctccaatcagtatttgagaatcctaatcaaaatgactttcaaattgaatat
agatttcaaaaaaataaaactgaatatgcctacgtcttagactctgggactgtcataaga
gatcaagaaggtaagccaaccagattagttggtgctgtgcaggatattagtgcgcaaaag
gattacgaaaactccctcaaacaattaaatgaaacgttagagaaggccaataaagagctg
gaactttccaatcaagaattggaacagtttgcatatgtggcatctcatgatttacaagag
cctttaagaatgatctccagctttttgggattgatcgaaaaaagatatgatacagtccta
gacgaaaagggaaagaaatatattcactttgctgtggaaggtgcaaagagaatgagacaa
atcatcttggatctcctcgaattttccaaactggataattttcaagaatccaaaatatgg
attgaatcatcagaaatcctgaacatttctaagcttttccttaaaaaaactatacagaaa
aaggatcctatcttccatatctcccaattaccgaaggtttttggacataaaagcaccttg
gttcagcttttccaaaacctgatttcaaacgcaatcaaataccaacctgaaggacaaaaa
cctgaaatttggatctctgcaaaagagaaaaaaaccgaatgggagtttgctttcaaagac
aatggaataggcatagaaaaagactatgtagaaaaaatctttattattttccaaagactg
catgtacaagaaagctattcaggaactgggatagggctagcgattagtaaaaaaattgtc
gacatgcatggaggtaaaatctgggtgaattctaccccatctaaaggttcaacattctat
ttcacgattcaaaagcctagcgaatga
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