Algoriphagus sp. NBT04N3: GYM62_05175
Help
Entry
GYM62_05175 CDS
T09623
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
algo
Algoriphagus sp. NBT04N3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_3
AAA_19
FtsJ
PrpR_N
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QYH38219
LinkDB
All DBs
Position
complement(1204820..1205977)
Genome browser
AA seq
385 aa
AA seq
DB search
MSKILIIDDEKVIRATLREILEYEKFEVSEAKDGEEGLAKLKEEDFDLVLCDVKMPKMDG
IEVLDQAKALEKSPQFIMISAHGSIETAVEATKKGAFDFIPKPPDLNRLLLTVRNALDKK
NLVTETKVLKKKLSKKFDMVGESKPILLVKETIEKVAPTDARVLITGPNGTGKELVAHWI
HQKSNRVSNPFVAVNCAAIPSELIESELFGHEKGAFTSAHKQRAGKFEQAQGGTLFLDEI
GDMSLSAQSKVLRALQENLINRVGSDKDIKVDVRVLAATNKDLKKEIEEGRFREDLYHRL
SVILIQVPALKDRKDDIPLLIDKFLDDIAQESGDAKKGITKDALAKLQEFPWTGNIRELR
NVVERLVILGEPTISLEDIKKYADY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatactgatcattgatgacgaaaaagtcatcagagccaccctcagggaaatc
ctggaatacgaaaaatttgaggtgagtgaggccaaagatggtgaagaaggcctggccaaa
ttgaaggaagaggacttcgatctggttctctgtgatgtaaaaatgcccaaaatggacgga
atagaagttctggaccaagctaaggctttggaaaaatcacctcagtttatcatgatttct
gcacatgggagtattgaaactgccgtagaagccaccaaaaaaggcgcctttgattttatc
ccaaaaccacccgatctcaatcgcctgcttcttacagtaaggaatgcattggataaaaaa
aatctggtgactgaaaccaaagtcctaaaaaagaaactttccaagaagtttgatatggta
ggtgaatccaagcctatcttattggtcaaagaaactattgaaaaagtagctcctacagat
gccagggtattaatcacaggccctaatggaacaggtaaagaattggttgctcactggatt
catcaaaaaagtaacagagtatccaatccttttgtggcagtcaattgcgcagctattcct
tctgaattaatagaatcagaactatttggacatgagaaaggtgcttttacctctgcccat
aagcaaagagccgggaaatttgagcaagcccaaggaggcacgctatttctggatgaaatt
ggagacatgtctctttcagcacaatctaaagtacttcgagctcttcaggagaatctgatc
aatcgcgttggtagtgataaggatatcaaagtagatgtgagggtactagcagctacaaat
aaggaccttaaaaaggaaattgaagaaggaagattcagagaagatttatatcaccgactt
agtgtaattctgattcaggttcctgccttgaaagacagaaaagatgatatacccttgttg
atagacaagtttttagacgatatagctcaggaaagcggagatgctaaaaaagggattacc
aaagatgctttggcaaaacttcaggaatttccttggacaggcaatatcagggaactacga
aatgtcgtggaacgtctggtaattttgggggaacccactattagcctggaggatattaaa
aaatatgctgactactaa
DBGET
integrated database retrieval system
