KEGG   Algoriphagus sp. NBT04N3: GYM62_05280
Entry
GYM62_05280       CDS       T09623                                 
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
algo  Algoriphagus sp. NBT04N3
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 Terminase_6N CorA
Other DBs
NCBI-ProteinID: QYH38239
LinkDB
Position
1231374..1234571
AA seq 1065 aa
MSDKPFIIYKSSAGSGKTYTLTLEYLKLALRQPQTAFKQILAVTFTNKATQEMKERILDV
LSRLSQQVDEAEFMDQELMKFLQVDAEGLKHKAKATLTAILHDYSHFSVSTIDSFFQKVV
RAFAREIDLNAKFEVELDQDGVLERVVDRVVMQVMDDEFLHKWLVDYATEQIQNGKTWDI
RRNIQGLGKQIFQENFKQHAGEIKSFLSEKENVDQLQKLVKSRRDGLIKIGKDLKQQANE
IRIANGLEWTDFSGSSNSFAKKFDQLGDRNKVVPDITKTMVEAIDNPERWYAKSSKKINE
IESAFQSGLNDILRQFEPLLFQWNTISAISRNIYVYGVFRNLLDDLSLIKSEENMLLISD
ANEFLKEITYENDAPFIYEKVGNQYQHFLIDEFQDTSGFQWASFKPLLENSISFGYRNLL
VGDVKQSIYRWRGGEMKLLLERVEEEIGAHLIKTENLDTNYRSLPRIIEFNNALFETLPT
SFERVLSNTYGVDDPSILSKAYADVKQKVSSKKKQSNFQGMVRMEFLEEDKELEEDGKFD
KQVLEKIPEQVRKLQDLGYQLKDIAFLVRTKSEGELIADCLMLEPASDQYRYDVLSDESM
YLHKAASVKALIAALSYLYQPDDEVQFKTMWYYRAVLLDQKVDHNLFSLDQIDEDFAKEI
KLFKAQEQALLQLPLLEMTEELIRILRIQETGLEKAYISGFREAVFDFISKNRSDLGAFL
DWWQDNKQKRTVKIPEGHDAMRILTIHKSKGLQFKVVLMPFLKWTIFDTTKDNIVWSPFK
DAETGIQAVIPLKLQSSLAQSLFAETYGEEAILAYLDSLNMIYVALTRAEEIFWSLSPYK
GSFNSQNYLELHLQQILEGGIQNLGTLEKESKIFQWGDWPESNIPDQTVFQMPPLRWTYK
KWQELLEVKQYAVDFSAEGMEQRKKRNFGLLVHEILEKSNTLAQAKLELESLYFEGRLSS
EEKEEVLSQLQALFENPLFASWFDPAQISLNEQGILLPGGKQKRPDRILLHQREAVVVDF
KTGEERDSYGKQVKEYMELVKSLTAKPCKGYLYYLETGKIEEVHA
NT seq 3198 nt   +upstreamnt  +downstreamnt
atgtcagacaaaccttttatcatctacaaatcttcagcaggatctgggaagacctatacg
cttacactagagtatctcaagttggcactaaggcagcctcaaacggcctttaaacagatt
ttggcagtgacttttaccaataaggccacgcaggagatgaaggagaggattttggatgtg
ctgtcaagattgtctcagcaggtggatgaggcggagtttatggatcaggaattaatgaaa
tttctgcaagtggatgctgaaggtttgaagcataaggcgaaggctacactgacagctatt
ttgcacgattacagtcatttttcagtcagcacgattgatagtttttttcaaaaagtagtt
cgtgcatttgcccgtgagattgatctcaatgcgaagtttgaggtagaattagatcaggat
ggagttctcgagagggtagtagatagagttgtcatgcaggtgatggatgatgaattccta
cataaatggttggttgattacgccactgagcagatacagaatgggaaaacctgggatatt
cggagaaatattcagggcttggggaaacagatttttcaggagaatttcaaacaacatgca
ggcgaaatcaagtcctttttgagtgagaaagaaaatgtcgatcaactccaaaaactggtt
aagagtcgaagagatggtcttatcaaaattggtaaagatttaaaacagcaagccaatgaa
ataagaatcgctaatggcttggagtggacagattttagtggtagttccaattcttttgca
aagaagtttgatcaactcggtgatagaaacaaggtcgttccagatatcacaaagacaatg
gtggaggccattgataatcctgaaagatggtatgctaaatcaagtaaaaaaatcaatgaa
attgaaagtgcttttcagtcaggtctaaatgatattctgcggcaatttgaacccttgctt
ttccaatggaataccatcagcgctatttctagaaatatttacgtttatggagtttttagg
aatctgttggatgatttatccctgatcaaatccgaagaaaacatgcttttgatttcggat
gccaatgagtttctcaaagaaatcacctatgaaaatgacgccccatttatctatgaaaaa
gtagggaatcaataccaacattttctgatagatgagtttcaagacacttcgggttttcag
tgggctagtttcaagcctctactcgaaaactctatttcttttggttatcgaaatcttttg
gtaggggacgttaagcagtctatttatcgttggcgtggaggagaaatgaaactcctcctt
gaaagagtggaagaggagataggtgctcatttgattaaaacagagaatttggataccaat
tataggagcttgcctcgtatcattgaatttaacaatgcattgtttgaaacgctcccaact
tcttttgagcgggtgctttctaacacttatggggtggatgatccaagtatattgtccaaa
gcctatgccgatgtaaagcaaaaagtatcctcgaaaaaaaagcaatctaatttccaaggg
atggtgcggatggaatttttggaagaggataaggagctggaagaggatggtaaatttgat
aaacaggtccttgaaaaaattccggagcaggtcaggaaactccaggatttgggctatcag
ttgaaggatatcgcttttttggttagaaccaagtcagaaggtgagctgatagcggattgc
ctcatgctagaacctgccagcgatcaataccgatacgatgtgctttcggatgaatccatg
tatttgcataaggcagcctcagtcaaagccctgatcgctgcactttcatacttgtatcaa
cccgatgatgaggtgcagtttaagaccatgtggtactatagagctgtacttttagatcag
aaagttgatcataaccttttttccttggatcagattgatgaagattttgctaaagagatt
aaattatttaaagcgcaggaacaggcattgttgcagcttcctttgttggaaatgaccgag
gagttgattcgcatacttcgaattcaagagacgggattggagaaggcctatatttctgga
tttcgggaagcggtctttgattttatatctaaaaatcgctcagatctgggagcgtttttg
gattggtggcaagacaataagcaaaagcgcacggtaaagatccctgaaggacatgatgcc
atgcgaattttgactattcataagtctaaagggctccaattcaaagtagttttaatgcca
tttttgaaatggaccatttttgataccaccaaagacaatatcgtttggtctccctttaaa
gatgccgaaacgggaattcaggctgttattccactgaagctgcagagtagcctagcccag
tctttattcgctgaaacctatggtgaagaggcaatattggcctatttggatagcttgaat
atgatctacgtggctctcactcgtgcagaggagatcttctggtccctatctccttataaa
ggttcttttaattctcaaaattacctagagctccatttacaacagattttagaaggcgga
attcaaaatctgggaaccttagagaaagagtcaaagatctttcaatggggtgattggcca
gaatccaatattcctgatcaaacggtatttcaaatgccacccttgcgctggacttataag
aaatggcaagaattattggaggtcaaacaatatgctgtagatttttccgctgaaggtatg
gagcagcggaaaaagcgaaattttggattgcttgttcatgaaattttagagaaatccaat
accctagctcaggctaaattagagctggaaagtctatattttgaagggaggttgagttct
gaagaaaaagaagaagttctttctcagcttcaggccttgttcgaaaatccactctttgct
tcttggtttgatcccgctcagatttcattgaatgagcagggcattctattgcctggaggt
aaacagaaaagacctgatcgtattctcctccaccaaagggaagcagtggtagtagatttt
aaaacgggagaagaacgggacagctatggcaagcaggtcaaggaatatatggaactcgtg
aaatcacttaccgcaaagccatgcaagggttatttatactatttagaaactggaaaaatc
gaagaagtacatgcataa

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