Algoriphagus sp. NBT04N3: GYM62_05345
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Entry
GYM62_05345 CDS
T09623
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
algo01002
]
GYM62_05345
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
algo01011
]
GYM62_05345
Peptidases and inhibitors [BR:
algo01002
]
Cysteine peptidases
Family C82
GYM62_05345
Peptidoglycan biosynthesis and degradation proteins [BR:
algo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GYM62_05345
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GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QYH38252
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Position
1247375..1249042
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AA seq
555 aa
AA seq
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MKANSHYINRFFLIAVFLFSGVCSAFASQKEVADKIRFILETDQPQRKLEVRGLPLLTSS
EIHTFYGAREFNPVWSFNGELTEFAYEMRYEIIQSKYDGLNPEEYNLKLIQTYFEAFESN
KKKKNANDFSDLADFDLLLTDAFFKLVTHLEVGKVDPSSLKSNWGIEPIQKQLDYIELLH
TALMRKEIRPVIQSVYPKFEIYRKGREVVRNLESIAKNDSLDWKPVKENKSIKVGETNSA
IPAIRDRLIFWGYFSGTAVADKSSKLYDSLLFEVVKRYQADNGLEADGILGRLTLESLNQ
SPKSLIDKASVNLERLRWLPDTIQNSTYILVNIANFELDFIDNRDTLFSEKVIVGQPYHQ
SPVFLAQMSYIVFSPYWNIPYSIMRNETLPAIRKNPSYLTRNNMEVITRSGKYVDPSTVD
FSSKSFPYLIRQKPGQNNSLGLVKFMFPNKYSVYIHDTPTRNLFEKEERALSHGCIRLKN
PTQLAQLLLKNNQDWDSQKIEKAMNQPREQIVNLDKKIPVILVYLTFWADSNGKGHFRSD
IYQRDAEILAALRSF
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctaatagccactatataaaccgcttctttttgattgcggtttttttattctca
ggagtttgctcggcttttgccagtcaaaaggaggttgctgataagattaggtttatcctg
gagaccgatcaaccccaaagaaaattggaagtgagaggcttgccattattgacatccagt
gaaattcatactttttacggagcgagagagtttaacccagtttggtctttcaatggggaa
ttgaccgaatttgcttatgagatgcgctatgagatcatccagtcaaaatatgatgggcta
aaccctgaagagtataatttgaaattaattcagacctattttgaagcttttgaaagtaat
aaaaagaagaaaaatgcgaatgatttcagtgatttggctgattttgatttgcttttgact
gatgcgtttttcaagctggttactcatttggaagttggaaaagttgacccatcatccttg
aaaagtaactggggaattgagcctattcaaaagcaattagactatatagaattactgcat
actgctcttatgagaaaggaaattcggccagtgatccagtctgtttatcctaaatttgaa
atctatcgaaagggcagagaagtagtcagaaatctcgaatccatcgcgaaaaatgattct
ttggattggaaaccagtcaaagaaaacaaatcaattaaagtaggtgagacaaattctgct
attcccgctatacgagatagattgattttttggggatatttttccggaactgctgttgct
gataaatcgtcaaaactctatgactctcttctttttgaagttgtaaaaagatatcaggca
gataatgggcttgaagcagacggtatcttgggtagattgactttagagtccctcaatcaa
tctccaaaaagtttgatcgataaagcttcagtaaacctggaaaggctgaggtggcttccg
gacaccattcaaaattccacctacattttggtcaatattgccaattttgaattggacttt
attgataatagggacacgcttttttctgaaaaagttattgttggccagccttatcatcag
tctccagtctttttggctcagatgagttatattgttttcagtccatattggaatattcct
tattccattatgcggaatgaaacccttcctgccattcgaaaaaacccttcttatttaact
agaaataatatggaggtgattacccgatcagggaaatatgtagatccttctactgtagat
tttagcagcaagtcctttccatacttgattaggcaaaagccaggacaaaataattcgctg
ggactggttaagtttatgtttccgaacaagtacagcgtttatattcatgatactcccacg
agaaacttatttgaaaaggaagagcgagcgctctcgcatggttgtatcaggttgaaaaat
cccacccaactagcacaattactattaaaaaataatcaagattgggattcacaaaaaatt
gaaaaagctatgaatcagcctagagaacaaattgtaaacctggacaaaaagatacccgtt
atcttggtttaccttactttctgggcggactcaaatggaaagggtcatttcagatcagat
atctatcagcgtgacgctgagattttagcggccctaagatctttttaa
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