Algoriphagus sp. NBT04N3: GYM62_05815
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Entry
GYM62_05815 CDS
T09623
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
algo03032
]
GYM62_05815 (gyrA)
03400 DNA repair and recombination proteins [BR:
algo03400
]
GYM62_05815 (gyrA)
Enzymes [BR:
algo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GYM62_05815 (gyrA)
DNA replication proteins [BR:
algo03032
]
Prokaryotic type
DNA Topoisomerases
GYM62_05815 (gyrA)
DNA repair and recombination proteins [BR:
algo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GYM62_05815 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
QYH38340
LinkDB
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Position
1354808..1357330
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AA seq
840 aa
AA seq
DB search
MAQGENENIIPINIEEEMRGAYIDYSMSVIVSRALPDVRDGLKPVHRRILYGMQELGVLH
NKPYKKSARIVGEVLGKYHPHGDSAVYDTMVRMAQPWSLRYQLVDGQGNFGSIDGDNPAA
MRYTEARLKRIAEELLVDINKETVDFQFNFDDSLKEPIVLPAKVPALLLNGASGIAVGMA
TNMAPHNLTEVINGIVAYIDNRDITVAELMEHIVAPDFPTGGIIYGYNGVKAAFETGRGR
IVVRGKANVETKEGGNKEMIVITEIPYMVNKASMVEKTAALINEKKIDGISAIRDESDRS
GMRIVYELKRDAMANVVLNNLYKQTQLQTSFSVNNVALVKGRPQTLNLKDLIVHYVSHRH
EVVVRRTEYELREAEKRAHILEGYLIALDHLDEVIALIRNSADPETARNGLMERFELSEI
QARAILDMRLQRLTGMERDKIIQEYKEIMALIEELKEILANEDKRMEIIKTELQEMKDRY
GDDRRTEIEHNAEDFSYEDMIPNEEVIITVSHQGYVKRTALTEYKTQGRGGVGSRGVSTK
EDDFTEYLFTASTHNYLLIFTDKGKLFWLKTYAIPEGGKTSKGRPIQNLINIQQDDKIRA
IIQVDDLNDEDYVNNHFLVMVTKQGVIKKTTLEQYSRPRSNGIIALNIREDDQLVNVDMT
NGDQHIVIAAKSGRAIHFHESAVRPMGRTATGVKAITLNNLNDYVVGMVCASEENATLLV
VSEKGYGKRSNLDEYRITNRGGKGVKAMNTTEKTGSLVAIKEVVDTDDLMIINKSGIIIR
ISVDNLRVMGRATQGVRLIKVGENDEISSVEKISKEEDVEEIDSSQIAENSSENSEDKDE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaggagaaaacgagaacattatacccattaacattgaagaggaaatgcgcgga
gcctacatcgattattcgatgtcggttattgtttcaagagcgcttccagatgtccgagac
ggactcaaaccagttcatagaagaatcctttacgggatgcaggaattgggagtattacac
aacaaaccttataaaaagtctgccagaattgtcggtgaggtactaggtaagtatcaccca
catggtgactcagcagtttatgataccatggttcgtatggcccagccttggtctttgcga
tatcagttggtagatggacaaggtaactttggttccatcgatggagataatcctgcagcg
atgcgttataccgaggcaaggttgaaaagaatcgccgaggaacttctggtagatatcaat
aaggaaactgttgattttcagttcaattttgatgactctctaaaagagccgattgttctt
cctgctaaggttcctgccctattacttaatggagcttccggaattgcagtaggtatggct
actaatatggcacctcataatttgacagaggtgatcaacggcatcgtagcctatattgat
aatagagatattaccgtagcagaactgatggagcatattgtagctcctgatttcccaacc
ggtggtattatatatggttacaatggagttaaggctgccttcgaaacaggtagaggtcga
attgtagttcgcggaaaagcgaatgtagagaccaaagaaggtggcaacaaagaaatgatt
gtcatcaccgaaattccatatatggtgaataaggcgagcatggtagaaaaaaccgctgcc
ttaatcaacgaaaagaaaattgatggaatttctgccattcgcgatgaatctgatagatca
ggtatgcgaatcgtatatgaactgaaaagggatgctatggcaaatgttgttttaaacaac
ttatacaagcaaacccagcttcagacttcattctcagtaaacaacgtggcccttgttaaa
ggaagaccacagaccctgaacttgaaggatctaatcgtacactatgtaagccataggcat
gaagtagtagtaagaagaactgagtatgagctaagagaagcagaaaaaagagctcatatt
ttggagggttacttgatcgctttggatcacttagatgaagtaattgctttaattagaaat
tcagccgatccggaaactgctagaaacggtttgatggaaaggtttgaattaagtgagatt
caagccagagcgattttggatatgagattgcagcgtttgacaggaatggagcgcgacaaa
atcatccaagaatacaaggaaattatggctttgatagaggaattgaaagagattcttgct
aacgaagacaaaaggatggagattattaagacggaacttcaggaaatgaaggatcgttat
ggagatgatcgccgaactgaaattgagcataacgcggaagatttcagctatgaagacatg
atcccaaatgaggaagtaattattactgtttctcatcaaggatatgttaaaagaacagcc
cttacagaatataaaacccagggtagaggtggagttggttctcgaggtgtaagcaccaaa
gaggatgatttcactgaatacttgtttaccgcgtctacccacaattacttattgatattt
accgataaagggaagttattctggttgaaaacttatgccatacctgagggtggaaaaaca
tctaaaggtagaccaatccagaacctgataaatattcagcaagacgataagattagggcg
attattcaagtagacgacttgaatgatgaagattatgtgaataatcacttcttggtaatg
gtcactaaacaaggtgtcattaaaaagactactcttgaacaatatagcagaccaaggtct
aatggtattatagctcttaatatcagagaggatgatcaattggtcaatgtagatatgact
aatggagatcaacacattgtgattgcagcgaagtcaggacgagctattcacttccacgaa
tcagctgtaagaccgatgggaagaactgccacgggtgttaaagccataaccttaaataat
cttaacgactatgtggttggcatggtatgtgcatccgaagaaaatgcaactctgttggta
gtttctgagaaaggatatggaaaacgttctaaccttgacgaatatagaattaccaatcgt
gggggtaaaggtgtcaaagccatgaacactaccgagaagaccggttcactggtagcgatc
aaagaggtagtcgacacagatgatttaatgattattaataagtccggaattattatcagg
atttcagtggataatctaagagtcatgggtagagccacccaaggagtacgattaataaaa
gttggggaaaatgatgaaatttcttctgttgaaaaaatctcgaaagaagaagatgtagaa
gaaatagattcttcccaaattgcagaaaattcttctgagaattcagaagataaagatgaa
taa
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