Algoriphagus sp. NBT04N3: GYM62_06330
Help
Entry
GYM62_06330 CDS
T09623
Name
(GenBank) T9SS type A sorting domain-containing protein
KO
K07004
uncharacterized protein
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
GYM62_06330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5689
Exo_endo_phos
Por_Secre_tail
LTD
SprB
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
QYH38436
LinkDB
All DBs
Position
complement(1476695..1479937)
Genome browser
AA seq
1080 aa
AA seq
DB search
MQKNLLRLAGIFLLLFTGFRLQAQEVFINEIHYDNVGTDVGEAIEIAGPAGTDLTGWSLV
LYNGANGASYNTRALSGTIADSGNGFGFVTLTYPTNGIQNGAPDGVALVNNGVVVQFLSY
EGTFLAVGGPADGLTSTNIGVEETSSTPIGFSLQLGGTGSTYTDFTWQTESAETFGSINT
NQTFSSEVVLFVNELHYDNVGSDVDEGIEVAGSAGLDLEGYKLILYNGNGGAVYGTVNLT
GVLPDQDNGFGTKFFAINGLQNGAPDGFALVNPSNEVIQFLSYEGVFTAVGGPADGLLSE
DIGVVQISSTPVGTSLQLQGTGTKYTDFTWSSTSITNTYNQVNTGQSFGGVIVDPEPVLI
SIAEARNKGIGSEVLVQGVLTVSDQLGGPAFIQDATGGIPVFDSQVHGLGNYQIGDEIRI
LGSIGAFNQQIQIVNISELELISSGNEVVPAALSISQINSGVEGQLISIPNAAFAISKGL
FFPESNYTITDGSGSLELRIDGDVSSLVGRVIPAEAQTITGVLGSFRGSLQLLPRFIEDL
PGTSPYEAAGSDIPNAETLDVMTWNMEFFGATIANFGPSNVSLQAENAIKVLQATLPDVI
AVQEVSDEDLLAFVVSQLPGYEVICSDRFSRSFEAPDPTFPPQKLCLIYNTAVLEIQSSK
VLFEQIYDEARLGLNNLLDEYPTGTPSSFWSSGRLPWLVEAVADINGVKERINFINIHAK
SGSSRDDLARKRFDNLALKDTLDAYYSDANIILLGDYNDDLDISIGGGPSTYEVIISDPD
FNGVTLSLSEAGLRSFIFNDNVIDHITISNELYDNYLEGSEQLFIPFNLVANYANTTSDH
LPVSVRFIAGEGISSDAGEGAIVYLGYEPLASTTLKAADASGGSGNYTYSWSNGQTGQEI
TVSPSETTTYTLTVRDDAGNIFQDEVTVCVVDVRCGSKDDKVLVCTSNGNSGKTQTICVA
PEAVPAFLRKGATLGDCGLIPCESNSESISKEASFRNAKVQKAYPNPLEDEVNITLDSNL
DIEVAYILFDEKGELVQSGTSSFNSGKLQLIIGSKQLKKGFYYLHLNHGQETKMIRLMKK
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaatttactacgattagcggggatttttctactgctttttacgggcttccga
ctgcaggctcaagaagtttttatcaacgaaattcattatgataatgtgggaacagatgta
ggtgaggctatagaaatagctggacctgctggtactgacttgacaggatggtcattggtt
ttatacaatggggcaaatggtgcatcctacaatacccgagctctttcaggtacaatcgct
gattctggaaatggctttgggtttgtaaccctaacttatcctaccaatggaattcaaaat
ggagctccagatggagttgccttagttaataacggagttgttgttcagttccttagttat
gaaggaactttcctcgctgttggtggtcctgctgacggcctaaccagcaccaatattgga
gttgaagaaacctcctctaccccaataggattttctttacaattagggggtacaggcagt
acttacacagattttacctggcaaaccgaaagcgctgaaacatttggttcaatcaataca
aatcagaccttttcttcagaagttgtgctgtttgtaaatgaattacactatgacaatgta
ggtagcgatgtggatgaaggcattgaagtagcgggctcagctggtctagacctagaaggg
tataaattgattctttataatggaaatggtggagctgtttatggcactgtgaatcttact
ggagtgcttcctgaccaggacaatggctttgggactaaattttttgctatcaatggattg
caaaatggtgctcctgatggattcgctttggtgaatccttctaatgaagtgattcagttt
ttaagttatgagggagttttcacagcagttggtggtccagcagatggcttactaagcgag
gatataggcgtcgttcaaatttcatctactcctgttggtacttctttacagctacaaggt
actggaaccaaatacacagactttacatggtcttccacctcaattaccaatacctataat
caagtcaatactggacagagttttggaggtgtaatcgtagacccagaaccagttttaatt
tccatagcagaggcaagaaataaaggaattggttcagaagtattagtacaaggcgtattg
actgttagtgatcaattaggtggacctgcattcatacaagatgctactggtggaatcccg
gtttttgactcccaagttcatggtcttggcaattatcaaataggagacgaaatcaggatt
ttaggatctattggagccttcaaccaacaaattcaaattgtcaatatttctgaattagaa
cttataagttctggaaatgaagttgtgcctgcagcactttccatcagccagattaattca
ggagtagaaggacaattgattagcattccaaatgctgcctttgctatttccaaaggtctc
tttttcccagaaagtaattataccatcacagatggtagcggaagtcttgaattgagaatc
gatggagatgtcagcagtttggttggaagagtgataccagctgaggcacaaaccatcacg
ggagtgttaggaagcttcagaggaagtctccaattacttcctagatttatagaggactta
ccgggtacaagcccatacgaagcagccggctctgatattccaaatgcagagaccttagat
gtgatgacttggaatatggagttctttggtgccaccatcgcgaactttggtccaagcaat
gtaagcttgcaagcagaaaatgctataaaagtgcttcaagctactttgccggatgtaatc
gcagtacaagaagtttcagatgaagatttattggctttcgtggtttcacagctaccagga
tacgaagtcatatgttcggatagattctcaagatcttttgaggctcccgatcctactttc
ccaccacaaaagctatgtttaatctataatacggctgtattagaaatccagtcttctaaa
gttctattcgaacagatttatgatgaagctagattgggattgaataacctattggatgaa
tatccaacaggaactccatcttcattctggtcaagtggcagattgccttggttggtggaa
gctgttgcagatataaacggagtcaaagagcgaatcaactttatcaacattcacgcgaaa
tccggttcaagcagagatgatttggccagaaaacgatttgataaccttgcattgaaggat
actttagatgcctactattcagatgccaatatcatcctattaggggattacaatgatgat
ttggacatttccattggcggaggtcctagcacctatgaagttattatcagcgatcctgat
ttcaacggggtaaccctttccttgagcgaagcaggtttgagatcctttatctttaatgat
aatgtcattgatcacatcacaatttccaatgagctttatgacaattatttagagggatct
gagcagttgtttattcctttcaatcttgttgctaattatgccaataccacttccgaccat
ttacctgtatctgtcaggtttattgcaggtgaaggcattagctcagatgcaggagaggga
gcaattgtttatttgggatatgaacctttagcttctaccacactaaaagccgccgatgca
agtggtggcagtggcaattacacctattcttggagtaatggtcaaacgggacaagaaata
actgtttcaccatccgaaaccactacttacacacttactgtgagagatgatgcagggaat
atctttcaagacgaagtcactgtttgcgtggtcgatgtgagatgcggatccaaggatgat
aaagtattggtttgcacttccaatggcaattctggaaaaactcaaaccatttgtgtggca
cctgaggcagttccggccttcttgagaaaaggagcaactcttggagattgcggtttgatt
ccttgtgaaagcaattctgaatctattagcaaagaggctagtttcagaaatgcgaaggtt
caaaaggcttatccaaacccattagaagatgaagtaaacattactttggattccaacttg
gatattgaagttgcttatatcctatttgatgaaaaaggtgagttagttcaaagcggaact
tcaagcttcaattctggtaagctccagctgatcattggatctaaacaattgaaaaaagga
ttctattatcttcatttgaatcatggtcaggagactaaaatgattcgattgatgaaaaag
taa
DBGET
integrated database retrieval system
