Algoriphagus sp. NBT04N3: GYM62_06570
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Entry
GYM62_06570 CDS
T09623
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
algo03036
]
GYM62_06570 (smc)
Chromosome and associated proteins [BR:
algo03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
GYM62_06570 (smc)
BRITE hierarchy
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
Tropomyosin
Crescentin
XdhC_CoxI
ABC_tran
HTH_34
Motif
Other DBs
NCBI-ProteinID:
QYH38479
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Position
complement(1533472..1537011)
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AA seq
1179 aa
AA seq
DB search
MLLSKLEIKGFKSFGDRMVINFDKGITGVVGPNGCGKSNVVDAIRWVLGEQKTRMLRSDK
MENVIFNGTKNRKPSNLAEVSLTFENTKNLLPTEYTHVTITRRYYRSGESEYQINGVTCR
LKDITNLFMDTGINSNSYAIIELKMIDELLNDKNNSRRELFEEAAGISKFKTRKKETLRK
LEDTDADLARVEDLLYEIEKNLKSLEKQAKQAAKYFEIKAEYKSASINLAKKSIEKYSKS
LIETNQKIQAESDRKLSFQTQIADQEAMLSQLKADLISKEKLLASRQKTLNEHVNKIRSF
ESEKKIKNERLRFLEDRSQKLREQIDADRKSNDRAGFSIRSLQQEMESAGKMLAEKEAVV
SELRAAYESQKEIQAEKQLQQKSQQQAFEGLKERVYQLSKDLEIKQIQLSTLKQELERTS
SDDSHQEASLVDFEAKIVDLKEELDQATAEFTSLKNKQEDLDQKIEESNRVIEMIREELT
TSSRKLDSKQNEYNLTKSLVENLEGFPEAIKFLKKNSSWGKDIPLLSDLLTTDEKYRVTI
ENYLEGYMNYYVVDTEAQAIAAIQLLSDASRGKANFFVLEHFERFKSSQSKLFTNAIAAT
EIIEFDVKYSRLINFILDNVYIVQGDYKDFPQDTEAVFISESGKYTKRKFSLSGGSVGLF
EGKRIGRAKNLEKLDKEIKELNKKVSATRSNLDQKLSDLMKLKEISYKKQLEEKQAAINE
INQSYVSVRTKKEQLAELLSSNANKREDILDRIAELEESLSTIQPDLLEQRGEYESAAQD
LEMLTEDLEKESSLLSEKSQAFNQENILYHQQLNRVNSLEQEIEFKQNAYESSKERIEKS
QAELASLDSEIKGLLENNEIKDDELIELYSEKEGIEAGVTEAEKDYYGSRGLIDETDQKI
RSLQKAKESHDQLLHELQNSINEIKLKMTSMKERLSVEFELDLDQLMEENPELDEEFADF
SEEDLRSLVQKHKEKLEKIGPINPMAMEAYDEIKERHDFIITQKDDLVKAKESLLTTIQE
IDDVAKETFLEAFDKIKENFIKVFRSLFTEQDDCDLKLTDPDNPLESSIEIMAKPKGKRP
LTINQLSGGEKTLTATSLLFSIYLLKPAPFCIFDEVDAPLDDANIDKFNQIIQQFSGESQ
FIIVTHNKRTMASTDIIYGITMIEAGVSRVVPVDLRELA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgctacttagtaaactggagatcaagggctttaagagttttggcgaccgaatggtcatc
aattttgacaaaggtattaccggtgtcgtggggcctaatggttgcggaaaatccaatgta
gtcgatgccatccgctgggtcttgggtgaacaaaaaacccgaatgctccgctcggataaa
atggaaaatgtgattttcaatggcaccaaaaaccgaaagccttccaacttggctgaagtg
tccctcacttttgaaaacaccaaaaacctcctccctactgaatatacccatgtcaccatc
acccgtcgctattatcgctccggggaaagtgaatatcagatcaatggggttacctgtcga
ttgaaggacattacgaatctcttcatggacacaggaatcaactcgaattcctatgccatc
atcgagctgaaaatgattgatgagttgctcaatgataaaaacaactctcgacgcgaactc
ttcgaagaagctgccggaatctccaagttcaaaacccgaaagaaagaaacacttcgcaaa
ctagaagacacagatgctgacctagcaagggtggaagatttgctttatgagattgagaaa
aacctcaaatccttagaaaagcaggcaaaacaggcagctaaatactttgaaatcaaagct
gaatacaagtctgcttccatcaatctggctaaaaaaagtatagagaagtactctaagtct
ttgattgaaacgaatcagaaaattcaggcggaatctgaccgcaaactttccttccaaact
caaatcgcagaccaagaggctatgttaagccagttgaaagcagatttgatttctaaggaa
aaactcttggcttctcgtcaaaagacactcaatgagcatgtcaataagatccgctctttt
gagtctgaaaagaaaatcaaaaatgagcgtctccgctttttggaagacagatcccaaaaa
ttacgggagcaaatagatgctgatagaaaatccaatgatagagcaggcttctccatccga
tcccttcaacaggaaatggaatctgcgggaaaaatgctggccgaaaaagaagctgttgtc
tctgaactcagagctgcctacgaatcccaaaaggagattcaggctgaaaaacaattgcaa
cagaaatctcagcaacaggcatttgaaggattgaaggaaagagtttaccaactcagcaaa
gacctagaaatcaagcaaattcaattatctactttaaagcaggaacttgagagaacttcc
tcagatgattcccaccaggaagcttctttggtggattttgaagccaaaatagtagacttg
aaagaagagctggatcaggcaacagcggaattcaccagcttgaaaaacaagcaggaagac
ctggaccagaagatcgaggaatccaatcgggtcattgagatgatccgcgaggaattgacc
acctcatccagaaaattagactccaagcaaaacgaatataacctcaccaaatccttggta
gagaatctggaaggttttccagaggctatcaaatttcttaaaaagaacagttcttgggga
aaagatatacccctcctctccgatctcttgactacggatgaaaaataccgggttaccata
gagaattacctggagggatacatgaactactatgtggtggacaccgaagcacaggcaatt
gcagcgatccaattgctttctgatgcttcccgtggaaaagccaatttctttgttttggag
cattttgagcgcttcaaatccagccaaagcaagttgttcacgaatgccatcgctgccacc
gaaatcatagaatttgatgtcaaatacagtcgtttgatcaacttcattctggacaatgtc
tacatcgtgcagggagattacaaggattttcctcaggacaccgaggctgtgtttatctcc
gaaagcggcaaatacaccaaacgtaaattctccctttccggtggttctgtaggccttttc
gaaggaaaaagaatcggtagagccaagaacctggaaaagctagacaaggagatcaaagaa
ctcaataagaaagtttctgctacccgatccaatctggatcaaaagctttctgacttgatg
aagctgaaggagatttcctacaaaaagcaattggaggaaaagcaggcagcgatcaatgag
atcaatcagtcttatgtctcggttcgaaccaaaaaagaacaactggcagaattactttct
tccaatgccaacaagcgagaggatatcctagatagaattgctgaactggaggaaagtcta
tccactatccaaccggatttattagagcagagaggtgaatatgaatctgcggctcaggat
ctggaaatgctgacggaggacttggagaaagaatcttctttgctttccgaaaaatctcag
gctttcaaccaggaaaatatcctctatcatcagcagctaaaccgagtgaatagcctggag
caggagattgagttcaagcaaaatgcttatgagagttccaaggagcgtatagaaaagtcc
caagctgaattggcctctttggattcagaaatcaaaggtctattggaaaacaatgagatc
aaggatgatgaattgattgaattgtattcagaaaaagaaggaatagaagctggggttact
gaagcggaaaaggattattacggtagtcggggcttgattgatgaaacagatcagaaaatc
cgcagtctacagaaagccaaggaaagtcatgatcaattgttgcatgaattacagaatagc
atcaatgagatcaagctgaaaatgacctccatgaaagagcgtctgagtgtggaattcgag
ttggatctggatcagctgatggaggaaaatccagagttggatgaagaatttgcagacttc
tccgaagaagacttgagaagcttggttcagaagcataaagagaagttggagaaaatcggc
cctatcaacccaatggccatggaggcctacgatgagatcaaggagcgtcatgactttatc
attacgcaaaaagatgacttggtgaaggctaaggaatccttattgaccaccattcaagaa
atcgatgatgtggccaaggagacctttttggaggcatttgataagatcaaggagaacttt
atcaaggtcttccgttccctctttacagagcaggatgattgcgacttaaagctgaccgat
ccggacaatcctttggagtccagcattgagattatggccaagcctaagggcaagcgaccc
ttgactatcaatcagctatctgggggagaaaagaccttgacagccacttccctactcttc
tccatctatctgctcaaaccagcgcccttctgtatttttgatgaggtggatgcacctttg
gacgatgccaatattgataagttcaatcaaattatccagcaattcagcggagagtcccag
tttatcattgtgacccacaacaagcgcaccatggccagtacggatattatctatggaatc
acgatgattgaggcgggcgtgagtcgagtagtgccggtggatttgagggagttggcttga
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