Algoriphagus sp. NBT04N3: GYM62_06885
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Entry
GYM62_06885 CDS
T09623
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
algo03016
]
GYM62_06885 (truB)
Enzymes [BR:
algo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GYM62_06885 (truB)
Transfer RNA biogenesis [BR:
algo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GYM62_06885 (truB)
Prokaryotic type
GYM62_06885 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QYH38535
LinkDB
All DBs
Position
complement(1606323..1607009)
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AA seq
228 aa
AA seq
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MQEVPYGEVFLINKPLEWTSFDVVKKVRNALKIKKVGHAGTLDPLATGLLIVCAGKMTKQ
IEGFMGQEKEYEGTFILGETTESFDLEKPVEFVADASEIKLEDVKRAAAELTGNILQIPP
MHSAIKVDGKRVYESARKGLEVKMEPRPVEVREFEILSYQDRKVKFRISCSKGTYIRSLA
RDLGEILEVGAYMSSLCRTRIGDLKLSQAKELLPLIEEIKARKANENL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagtaccctacggcgaagttttcttaatcaataagccgctcgaatggacctcc
tttgatgtggtgaaaaaagtgcgaaatgcactgaaaattaagaaagtgggacatgccgga
acattagaccctctagctacaggcttattgattgtttgtgctgggaaaatgactaagcaa
atagaaggcttcatggggcaagaaaaggaatacgaaggcacctttatattaggggaaacc
acagaatcctttgatctggaaaagcctgttgaatttgtggctgatgcttctgaaataaaa
ttagaagacgtaaaaagagctgcagctgagttgacaggtaatatactccaaatccctcct
atgcattcagctatcaaagttgatggaaaacgggtgtacgagtcggcccgaaaaggtttg
gaagttaaaatggaacctagaccagtggaagttcgggaatttgaaattttaagctatcag
gatcggaaagttaagtttagaatttcttgctcaaaaggaacctatatccgaagcttagct
agagatcttggcgaaattttggaagtcggtgcttatatgagttcactttgcagaacccgt
attggtgatttgaaactttcgcaagcaaaagagcttttacctttaatagaagaaatcaaa
gcccggaaagcgaatgaaaatttatga
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