Algoriphagus sp. NBT04N3: GYM62_07300
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Entry
GYM62_07300 CDS
T09623
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
algo03400
]
GYM62_07300
DNA repair and recombination proteins [BR:
algo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GYM62_07300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
AAA_10
ResIII
FtsK_SpoIIIE
AAA_16
Zot
AAA_30
AAA_19
T2SSE
DUF7750
AAA_7
AAA_6
Motif
Other DBs
NCBI-ProteinID:
QYH38609
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Position
complement(1691753..1693291)
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AA seq
512 aa
AA seq
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MSQEEKFISHLAEGQVYKKDYIIMGTGILNGEAVSGAQIKVPLKTMNRHGLIAGATGTGK
TKTLQVIAEQLSLKGVPSVLMDLKGDLSGLAQPGEASDFILKRSQKIGVDYEPMGLPVEL
MSISKEKGVKLKATVSEFGPILISQILDLNDTQGGVISLVFRYCDTHHLPLVDLKDLKRV
LQFIVNEGKEAITKEFGSVSSASVNTIMRKIIELEQQGAERFFGEKSFDVEDFVRTKNGK
GVISVIRLTDIQSTPKLFSTFMLSILSEIYETFPEQGDADQPKLCLFIDEAHLVFSTASK
DLLEKIEAIIKLIRSKGVGVYFCTQTPTDVPDSVLGQLGLKVQHALRAFTAKDRKAITKT
AENYPDSPFYDTSKVLTSMGIGEALITALNEKGIPTPLAHTLVRAPISRMDILTNSEIDD
LVNKSSLTSKYNEDIDRESAFELLEKKMNQIEKEQEKAVLPGPSSRSKTASRTKEDESLI
EELSKNTMVRQLGRTIFRELTRGILGSFTRKR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaagaaaagtttatctcccatctggctgaaggtcaggtttataaaaaagac
tatatcatcatgggaactggtatcctaaatggagaggcagtttcaggagcccaaatcaag
gtgcctcttaaaaccatgaacagacacggcttgatagcaggtgccacaggaacaggtaaa
accaaaactcttcaggtaattgcagaacagctctcattaaaaggtgttccatcggttttg
atggatttgaagggagatttatctggcttggctcaacctggagaagcttcagacttcatc
ttaaaaagatctcaaaaaataggggtagactatgagccgatgggcttacccgtagaatta
atgtctatctctaaggagaaaggtgtcaaattaaaggctacagtttctgaatttggtccc
atcctgatttctcaaattttggatttgaatgatacgcagggaggagttatctctttggta
tttagatattgtgatacacatcatcttccgttggtagatttgaaagatctgaaaagggtg
cttcagtttatcgttaatgagggcaaagaagctatcacaaaggaatttggaagtgtatcc
tcagcatcggtgaataccatcatgcgaaagattatagaacttgagcaacagggtgctgaa
aggtttttcggagagaaatcctttgacgtggaagacttcgtaagaactaaaaatggaaaa
ggtgtcatttctgtgattcgattgactgatatccaatctacgcccaaactcttttctacc
ttcatgctcagcattctttctgagatttatgaaacctttccagagcaaggagatgctgat
caacctaagctttgtttgtttatagacgaagcacacttagttttttctactgcttccaaa
gatcttttagagaagattgaagcaattatcaagttgattcgttcaaaaggtgttggggtg
tatttttgtacgcaaacccctacagacgttccagattctgtcctaggacaattaggttta
aaggtccagcatgctttaagagcctttacagcaaaggacaggaaagccatcactaaaact
gctgaaaattaccctgactctccgttttatgatacttccaaagtattgacctccatgggg
ataggagaagccttaattactgctttgaatgaaaaaggtattcctacacctttggctcat
acccttgtcagagcgccaatttcaagaatggacattttaaccaattcagaaatagatgat
ttggttaataaatcttctttgacctcaaaatacaatgaagatatagacagagaaagtgca
tttgagttgctggaaaagaagatgaaccaaattgaaaaagaacaggaaaaagctgttttg
cctggtccatcttcaagatccaaaacagcaagtcgtaccaaagaagacgaatctctaatc
gaggagttgagtaaaaataccatggttaggcaattgggaagaactattttccgagaattg
acgcgtggtattttaggttcatttacccgtaaaagataa
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