Algoriphagus sp. NBT04N3: GYM62_08075
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Entry
GYM62_08075 CDS
T09623
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
algo03400
]
GYM62_08075
Enzymes [BR:
algo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GYM62_08075
DNA repair and recombination proteins [BR:
algo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GYM62_08075
Prokaryotic type
GYM62_08075
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QYH38756
LinkDB
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Position
complement(1862615..1864084)
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AA seq
489 aa
AA seq
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MEKISVVWLKRDLRLKDHPALDAAINLGHPILLAYVFEPSLIQASQSDLRHWRFVWESLE
DLNRQLQPYQTEVAIFHQEVNEIFSQLELGFEIAAVFSHQETGIQITFQRDLQIKSWLQS
RNIPWYEFLQQGVRRGRKSRANWRKEWFSYVAATQVDPKLNQARFLSNTEIEQILKSNLN
IPEDWKKPNPLMQKGGETIGHKYLKSFVEDRVSNYSRNISKPERSRRSCGRVSPYLAWGC
LSIRQVFQASEIKKKEKFQVRNFTNFQSRLRWHCHFIQKFEMECRMESEPINRGFLKVEY
KKNPAFIQAWKEGNTGIPLIDACMRCLIQTGYLNFRMRAMLVSFLTHHLGQNWKDGSDHL
GRQFLDFEPGIHYPQLQMQAGVTGINTVRIYNPIKQSKDHDPEGEFIKKWVPELSQIPSA
LVHEPWKISPLEQEDLDFHLGKDYLFPIVDPEKAGAEARKRIWAAQKDPAVLKESERIVE
QHTLPNRWA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaaatttctgttgtctggctaaaacgagatttaagattaaaggaccatccagct
ttggatgctgccattaatctggggcatcccattctattagcctatgtttttgagccttct
ttgattcaagcttctcaaagtgatcttcgtcattggaggtttgtatgggaatctctagaa
gatctgaatcggcagcttcaaccttatcaaactgaggttgctatttttcatcaagaagta
aatgaaattttcagccaattggagttagggtttgaaatcgctgccgtattctctcatcag
gaaacaggaattcagataacttttcagagagatttacaaataaaatcctggcttcaatct
agaaatataccttggtatgagttccttcaacaaggagttagaaggggtagaaaatcaaga
gctaattggagaaaggaatggttttcctatgtggcagccacacaagtagacccgaaatta
aatcaagcaagatttctctctaacacggaaatagaacaaattctaaaaagtaatttgaat
attcctgaggattggaaaaaacctaatccattgatgcagaaaggaggggagactattggg
cacaaatacctaaaaagctttgtagaagatagagtttccaattacagcaggaatatttca
aagcctgaaagaagtagaaggagctgtggaagagtttcgccttatttagcttggggatgc
ttatcgatccggcaagtttttcaggcttcggaaattaaaaagaaggaaaaatttcaggtt
agaaacttcaccaattttcaatcccgactaagatggcattgtcattttatccaaaaattt
gagatggaatgccgaatggagtctgaacctattaatagggggtttttaaaagttgaatac
aaaaaaaatccagcctttattcaggcttggaaggaaggaaataccggcattccattgata
gatgcctgtatgagatgtttgattcaaacaggttatttgaattttagaatgagagctatg
ctggtttcatttcttacccatcatttagggcaaaattggaaagatggctcagatcatttg
gggagacagtttttagactttgagcctggtatacattatcctcagctacagatgcaggcg
ggagtgacaggaatcaatacagtgagaatctataatcctatcaaacaatccaaagatcat
gatcctgaaggggagtttattaaaaaatgggtaccggaattaagccaaattccatctgct
ttggtccatgaaccatggaaaatcagtcctttagagcaggaagatttagactttcacttg
ggaaaagactatttatttccaatagtggatcccgaaaaagcaggagcagaggccagaaag
agaatatgggcagcgcaaaaagatccagcggtcctcaaggaatcagaacgaatagtggag
caacatactttaccaaacagatgggcatga
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