Algoriphagus sp. NBT04N3: GYM62_08425
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Entry
GYM62_08425 CDS
T09623
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GYM62_08425 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
algo01007
]
GYM62_08425 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
algo03016
]
GYM62_08425 (lysS)
Enzymes [BR:
algo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GYM62_08425 (lysS)
Amino acid related enzymes [BR:
algo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GYM62_08425 (lysS)
Transfer RNA biogenesis [BR:
algo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GYM62_08425 (lysS)
Prokaryotic type
Other AARSs
GYM62_08425 (lysS)
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QYH38820
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Position
complement(1934590..1936296)
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AA seq
568 aa
AA seq
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MQLLSEQEIERRKDREELMQLGINPYPAEAFPINVTSEDIHKNYENHKTDYKDISIAGRL
MTKRIMGSASFAEIQDSTGRLQIYVRRDDICPGEDKTLYNSVFKKLLGIGDFIGVKGYIF
TTQTGEISLHVTELKVLSKSVKPLPVVKRDEEGNVYDGFTDPEMRYRQRYVDLTVNPEVK
QTFITRSKIISTMRRYFDDHGWLEVETPILQAVHGGAAARPFQTHHNTLDMPLFLRIANE
LYLKRLIVGGFDGVYEFGKMFRNEGMDRTHNPEFTSMEIYVAYKDYIWMMEMVEDLLEKV
TLAIHGDTKVKVGEKEIDFAGPYRRLTMYDSIKEYAGIDVSKMGEEELRKVCTELGIEVD
DSMGKGKLIDEIFGEKVEEHLVQPTYITDYPIEMTPLAKKHRTEPGLVERFELFVNGKEI
ANAYTELNDPIDQRERFEDQLKLAERGDDEAMAMDEDFLRSLEYGMPPTSGLGIGIDRLT
MLLTNKTTIQEVLFFPQMRPEKKQVEMTEEEKMIFELVKGNQPALLPEIKGMTDLSNKKW
DVAMKGLSKKGVVSVRKEGENLFIDLAE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttttgagtgaacaggaaatcgaacgaagaaaagacagggaagagctgatgcaa
ttagggataaacccttacccagctgaagctttcccaatcaatgtcacttcagaggatatt
cataaaaattacgaaaatcataaaaccgactacaaagatatctcaattgctggtcgattg
atgactaaaagaatcatgggctcagcttcatttgctgagattcaggattctactggaagg
ttacagatttatgtaagaagggatgatatctgtccgggagaggataaaacactttacaat
agtgtattcaaaaagctattgggtataggagattttataggagttaagggatatattttt
actactcaaactggagagatttcccttcatgtcactgaattgaaggttctttctaaatcc
gttaagccattacctgtagttaaaagagacgaagaagggaatgtctacgacggatttaca
gatcctgaaatgcgctatagacaacgctatgtggatttgactgtcaatccagaagtgaag
caaactttcatcaccagatccaaaattatttctaccatgcgtagatattttgatgatcac
ggatggttggaggtagaaactcctattcttcaggctgttcatggtggtgctgctgcaaga
cctttccagactcatcataatacgctggacatgcctctgtttttgagaatcgcgaatgaa
ctatatctaaagaggttgattgttggtggctttgatggagtttatgagtttgggaaaatg
ttccgtaatgaaggaatggaccgaactcacaatccggaatttacatccatggaaatctat
gtagcctacaaggattacatctggatgatggaaatggtggaagatcttcttgaaaaagtt
accctagcgattcacggagataccaaagtcaaagtaggagagaaggaaattgattttgca
ggtccttaccgtcgtttgacaatgtacgattcgattaaggaatatgctggtattgacgta
agtaaaatgggagaagaagaactcagaaaagtttgtactgagctaggcattgaagtagat
gattctatgggcaaaggcaaactgattgatgagattttcggagaaaaagttgaggaacac
ttagttcagccaacatatatcaccgactacccaattgaaatgactcccttggcaaaaaag
cacagaacagaacctggcttggtggagcgatttgaattgttcgtgaatggaaaagaaata
gctaatgcctacacggaattaaatgatccaattgatcagcgagagagatttgaagatcag
ttgaaactagccgaaagaggagatgatgaggcgatggccatggatgaggatttcttgaga
tctttggaatatggaatgccacctacttcgggattgggtattggaatcgatagattgacc
atgttgctgaccaataagactactattcaggaagtattattcttccctcaaatgagacct
gagaaaaagcaggtggaaatgactgaggaagaaaagatgatttttgaattagtaaaggga
aatcagcctgctttattgcctgaaatcaagggtatgactgatttgagtaataaaaagtgg
gatgttgctatgaaaggcttaagcaaaaaaggagtggtatctgttcgaaaagaaggtgaa
aacctttttattgatttggcagagtag
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