Algoriphagus sp. NBT04N3: GYM62_08670
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Entry
GYM62_08670 CDS
T09623
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo00061
Fatty acid biosynthesis
algo00071
Fatty acid degradation
algo01100
Metabolic pathways
algo01212
Fatty acid metabolism
algo02024
Quorum sensing
algo04146
Peroxisome
Module
algo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GYM62_08670
00071 Fatty acid degradation
GYM62_08670
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GYM62_08670
09145 Cellular community - prokaryotes
02024 Quorum sensing
GYM62_08670
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
algo01004
]
GYM62_08670
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
algo04147
]
GYM62_08670
Enzymes [BR:
algo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GYM62_08670
Lipid biosynthesis proteins [BR:
algo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GYM62_08670
Exosome [BR:
algo04147
]
Exosomal proteins
Exosomal proteins of breast milk
GYM62_08670
Exosomal proteins of breast cancer cells
GYM62_08670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
QYH38865
LinkDB
All DBs
Position
complement(1993777..1995462)
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AA seq
561 aa
AA seq
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MKDFPWFKHYPASVEKEVNCEAYSSVADLFDESVEKYKDAVAYECMGKTMSFNQVNEYSA
HFASYLTEELKLKKGSRVAIQMPNILQYPVVMFGALRAGMVVVNTNPLYTSSEMKHQFND
SGADVIVIVANFAYNLEKILHEIPAKHVIITELGDMLGGFKGTLVNLVVKHIKKMVPAYS
IPNAVSLKSTLSKGAKHSFKKPKISLQDTAFLQYTGGTTGVSKGAELTHGNIVANMQQIS
AWMKPKLKEREEIVITALPLYHIFALTVNCLAMLKIGAHNLLITNPRDMKAFCKDLSKHQ
FTVFTGVNTLFNGLLNQEAFLNLDFSKLKIAVGGGMAVQKVTAEKWKKVTGVPLAEGYGL
TETAPVATCNPIDGTERIGTIGIPLPNTEVMIANDEGEPLGLGERGEILIKGPQVMKGYW
NRPKETANVMHGDWFKSGDIGVMDEDGFFKIVDRKKEMILVSGFNVYPNEVEDCIASCPG
VLEVGVIGMPDPKSTEKVVAYVVAKDQSLKAETVIAHCHESLTNYKIPKEVYFTDELPKS
NVGKILRRKIKEAHIEKHGDK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattttccgtggtttaaacattaccctgcctctgttgaaaaagaagtgaattgt
gaagcatactccagtgttgcagatttattcgatgaaagcgttgagaaatacaaagatgca
gtcgcctatgaatgtatgggtaagacaatgtctttcaatcaagtaaatgaatacagtgct
cattttgcttcttacctgactgaggaattaaagttgaaaaagggttcccgcgtggcaatc
caaatgcctaatattcttcaatatcccgtggtgatgtttggtgccctgagggctggaatg
gttgtagtaaataccaatccgctttatacatcttccgagatgaagcatcagttcaatgat
tctggggcagatgtaatcgtgatcgttgccaactttgcctacaacttggagaaaatcctt
catgaaattcccgctaaacatgtcataataacagaattaggggatatgttgggtggtttc
aaaggcactttggtgaacttggtggtgaagcatatcaaaaaaatggttcctgcttacagt
attcccaatgctgtttctttgaaatccacactttcaaaaggagctaagcatagcttcaaa
aaaccaaagatttctcttcaagataccgctttcctgcaatatacaggaggaactacagga
gtttccaaaggtgcagagttaacccatggcaatatagtagccaacatgcagcagatttct
gcttggatgaaacctaagttgaaagagcgagaggaaattgtaattactgctttgccatta
tatcatattttcgccttgacagtgaattgtttggctatgctaaaaattggagcacataac
cttttgatcaccaatccaagggatatgaaggccttttgcaaagacctatccaagcatcaa
ttcacggttttcacaggtgtaaataccttgttcaatggacttctcaatcaagaggcattt
ttgaatcttgacttcagcaaattaaagatcgcagtaggaggagggatggctgttcagaaa
gttactgccgaaaagtggaaaaaagttactggagttcctttagcagaggggtatggcttg
acagagactgcaccagtagctacatgtaatcctattgatggaactgagagaattgggaca
attggaattcctttgccaaatacggaagttatgattgccaatgacgagggtgaaccattg
ggattaggagaaagaggagagattttgattaaaggacctcaagtgatgaaaggctattgg
aatcgtcccaaggaaaccgcaaatgtaatgcatggagattggtttaagtcaggagatatt
ggagttatggatgaagatggcttcttcaaaatcgtggatagaaagaaggaaatgatacta
gtttctgggtttaatgtctatcctaatgaagttgaagattgtatagcttcctgtccagga
gtactagaagtcggggtaattggaatgccggatcctaaatcaactgagaaagtggtagcc
tatgtagtagcaaaagatcaaagtctgaaggctgagactgttatagcacattgccacgaa
tctttgaccaactataagattccaaaagaagtatattttactgatgagctacctaaatcc
aatgtgggtaagattctgaggagaaaaatcaaagaggctcatatagaaaagcacggagac
aaataa
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