Algoriphagus sp. NBT04N3: GYM62_10220
Help
Entry
GYM62_10220 CDS
T09623
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GYM62_10220 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
algo03019
]
GYM62_10220 (groL)
03110 Chaperones and folding catalysts [BR:
algo03110
]
GYM62_10220 (groL)
03029 Mitochondrial biogenesis [BR:
algo03029
]
GYM62_10220 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
algo04147
]
GYM62_10220 (groL)
Enzymes [BR:
algo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GYM62_10220 (groL)
Messenger RNA biogenesis [BR:
algo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GYM62_10220 (groL)
Chaperones and folding catalysts [BR:
algo03110
]
Heat shock proteins
HSP60 / Chaperonin
GYM62_10220 (groL)
Mitochondrial biogenesis [BR:
algo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GYM62_10220 (groL)
Exosome [BR:
algo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GYM62_10220 (groL)
Exosomal proteins of other body fluids (saliva and urine)
GYM62_10220 (groL)
Exosomal proteins of breast cancer cells
GYM62_10220 (groL)
Exosomal proteins of colorectal cancer cells
GYM62_10220 (groL)
Exosomal proteins of bladder cancer cells
GYM62_10220 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
QYH39147
LinkDB
All DBs
Position
2366599..2368227
Genome browser
AA seq
542 aa
AA seq
DB search
MAKELFFDTDARDRLKKGVDALADAVKVTLGPKGRNVIIDKKFGAPTITKDGVSVAKEIE
LEEPIENMGAQLVKEVASKTADNAGDGTTTATVLAQSIFNVGIKNVAAGANPMDLKRGID
KAVAAVVARLKENSKEISTSKEIAQVATVSANNDEEIGQMISDAMDKVGKDGVITVEEAK
GTETEVKTVEGMQFDRGYLSPYFVTNTEKMEAELESPYILIYDKKISSMKELLPVLEPVA
QSGKPLVIISEDVDGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAILTGGTVI
SEERGFKLENATVDMLGRAEKINIDKDNTTVVNGAGDPNAIKGRIAEIKAQIEKTTSDYD
REKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVQEGVVVGGGVALVR
AVDALADLKGSNEDQDTGINIIRQAIESPLRTIVLNAGGEPSVVINKIRENKGNYGYNAR
TDQYEDLFAAGVIDPTKVTRLALENAASIAALLLTTECVVADVKEDGPAMPPMGGGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaactatttttcgatacagacgcaagagacagactgaaaaaaggcgttgat
gctttggcagacgctgtgaaagttacgcttggtccaaaaggaagaaacgtaatcattgat
aaaaaattcggtgcacctaccattactaaagatggtgtatctgtagcaaaagaaatcgaa
ttggaagagcctatcgaaaatatgggcgctcagttggtgaaagaagtagcttccaaaact
gctgataacgcaggtgacggtactactactgcaactgttttggctcagtcaattttcaac
gtaggtatcaaaaacgtagctgcgggtgctaaccccatggatttgaaaagaggtattgac
aaggcggtagctgctgtagttgccagattgaaagaaaactccaaagagatttctacctct
aaagaaatagctcaggtagctactgtatccgctaacaacgacgaagaaatcggtcagatg
atttctgatgcgatggacaaagttggaaaagacggtgtaatcactgtagaagaagcaaaa
ggtactgaaactgaagttaaaactgtagaaggtatgcagtttgacagaggttacctttct
ccatactttgtgaccaacactgagaaaatggaagctgaattggaatctccttatatcttg
atttatgataagaagatttcttccatgaaggagttgcttccagtattggagccagttgca
cagtccggcaagcctttggtaattatttctgaagatgtagacggagaagcattggcaact
ctagtagttaacaaaatcagaggtgctctgaaagtggctgctgttaaagctcctggtttc
ggtgacagaagaaaagcaatgttggaagacatcgctatccttactggcggtactgtaatc
tctgaagagagaggattcaaattagagaatgctactgttgatatgttgggtcgtgctgag
aaaatcaacatcgacaaggacaacactactgtggtaaacggtgctggtgatccaaatgca
atcaagggtagaatcgctgagatcaaagctcaaatagaaaaaactacttctgactatgac
agagagaagttgcaggaaagacttgctaaactttctggtggtgtagctatcctatatatc
ggagctgcaacagaagtagaaatgaaagagaagaaagaccgtgtagatgatgcattgcat
gctaccagagctgctgtacaagaaggtgtagtagtgggtggtggtgtagctcttgtaaga
gctgttgatgctttggcggatttgaaaggatccaacgaagaccaagacacgggtatcaat
atcatcagacaggcaattgagtctcctttgagaactatcgtattgaacgcaggtggcgag
ccttctgtagtaatcaataagatcagagaaaacaaaggaaactatggttacaatgcgaga
acagatcaatatgaagatctattcgcagcgggggtaatcgacccaactaaggtaaccaga
cttgctttggaaaatgcggcttcaatcgcagcattgcttttgactaccgaatgtgtagta
gcagacgttaaagaagatggtcctgcaatgcctccaatgggcggcggaggaatgggtgga
atgatgtaa
DBGET
integrated database retrieval system
