Algoriphagus sp. NBT04N3: GYM62_10310
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Entry
GYM62_10310 CDS
T09623
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo02020
Two-component system
algo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GYM62_10310
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GYM62_10310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
algo03000
]
GYM62_10310
Transcription factors [BR:
algo03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
GYM62_10310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
MarR_2
HVO_A0261_N
HTH_46
HTH_3
HTH_11
HTH_31
Rrf2
Motif
Other DBs
NCBI-ProteinID:
QYH39165
LinkDB
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Position
2383585..2384211
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AA seq
208 aa
AA seq
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MNKANISLPQSKFPQLLRFKKGEQILEQGQLFQGYFLIKSGLVKTVRSQEPGNSTLLSIK
DQGEFLGEFYEERAEKRLSYSAFAMEDHTLVEMIQLEENPNQKLLRIIHTLQVEIHTARL
RLERILFQDAEFRIISVLKDLGERFGEKYGDETLLKLPLTHEELAKLTDTSRQTVTTILS
GLKAQNKINYSRGRILFRNIHQLKTPNS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaaacatatcccttcctcaatccaaattccctcagctactgcgatttaag
aaaggcgaacaaattttggaacaaggccaactctttcaaggctattttctgattaaatcg
ggcttggtcaagactgtccgctcccaagaacccggcaacagcactctcctttccatcaaa
gatcagggggaattcctaggtgaattttatgaagagcgcgcggaaaaaagactctcctac
tcggcctttgctatggaggaccatacactagtggagatgatccagctagaggaaaatccc
aaccaaaaactcttgagaatcattcatactcttcaagtagaaattcatactgcaagactg
cgcttggagcggatcttattccaagatgcagaatttagaatcatctccgtactcaaagat
cttggggagcgatttggagaaaaatatggagatgaaaccctgctcaagctccccttgacc
catgaagaacttgccaagctgacggataccagccggcagactgttaccactatcctctca
ggcttgaaagcccaaaacaaaatcaattacagccggggaagaattcttttccgaaacatt
catcaactcaaaactcccaactcatga
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