Algoriphagus sp. NBT04N3: GYM62_11055
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Entry
GYM62_11055 CDS
T09623
Name
(GenBank) peptidase S13
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo00550
Peptidoglycan biosynthesis
algo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GYM62_11055
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
algo01002
]
GYM62_11055
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
algo01011
]
GYM62_11055
Enzymes [BR:
algo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GYM62_11055
Peptidases and inhibitors [BR:
algo01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
GYM62_11055
Peptidoglycan biosynthesis and degradation proteins [BR:
algo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GYM62_11055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
QYH39295
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Position
2549439..2550746
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AA seq
435 aa
AA seq
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MKKILFAILLLGSSCTVQKINCSIKKSEVFNQGHMGMMVVDPIKDKTLIDINSGKYFIPA
SNTKLFTFYTSYTVLGDSLINGLNYLEKGDSLIFWGTGDPSLLHPDLKNEKAINFLKNSK
KELYLLDNFEQVDAFGPGWSWDWYNAYYATERSAFPIYGNVLRFKYDIGDPNFTINPTWF
KPFLSAQKTENWTGYNFKRDRYQNLFSYQFTDKPEQKSFERDIPFVTSAELTALMLSAIL
DKKITLIKDQAYFSEEPKKLLSTPADSIYAQMMKISDNFLAEQLLLLVSDQLSNKLSTRD
AIAYAKENLLGDLPDEPVWYDGSGLSARNMFTPRSIIALLAKIRAEVPLEKIKAYFPAGG
ESGTIRNWYPSDPGQEPYIYAKTGTLSMSNALSGYLITKSGKILHFSCLFNNYTISSNEL
KTELQKILYRLHDQY
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattcttttcgcaatcctgctactcggtagttcatgtaccgttcagaagatc
aactgctccattaaaaaatctgaggttttcaatcaggggcatatgggaatgatggtagtt
gaccctatcaaggacaaaaccttgatagatatcaattctggcaaatatttcattcctgcc
tccaataccaaacttttcaccttttacacctcttacacggttttgggtgacagcttgatt
aatggcctcaattatctggaaaaaggagactccttgattttttggggaaccggtgatccc
agtcttttgcatcccgatctgaaaaacgagaaagcgattaattttttaaaaaacagcaaa
aaggagctgtatctcctggacaattttgaacaagtagatgcttttggcccaggatggtct
tgggattggtacaatgcttactatgccacagagcgctcagcctttccaatttatggaaat
gtcctccgcttcaagtatgatatcggagatcctaatttcaccatcaatccaacctggttt
aagccctttctttccgctcaaaaaacagaaaattggactggatacaatttcaagagagat
agatatcaaaacttattttcctaccaatttactgataagcccgaacaaaaaagtttcgaa
agagacatcccttttgtgacttctgccgagctcacggccttgatgctttcagctatttta
gataaaaagatcactctgataaaagaccaagcctacttttccgaagagccaaaaaaatta
ctcagtacgccggctgacagcatttatgctcagatgatgaaaatctcggataattttcta
gcagagcaattattgctgttggtttctgatcaactcagcaataaactaagcactcgggat
gccattgcttacgcaaaggaaaatttattaggtgacttaccggatgaaccggtatggtac
gatggctccgggctttcagctcgaaatatgtttactccgcgttccattattgcactcttg
gctaaaatcagagctgaagttcctttggaaaaaatcaaagcctatttccctgccggagga
gagtcaggcacaatccgcaactggtatccttccgatcctgggcaggagccctacatctat
gctaaaacaggaactctcagcatgagtaatgccctcagtgggtatttgatcacaaaaagc
gggaaaatccttcacttttcctgtctttttaacaattacaccatttcatccaacgaatta
aaaaccgaacttcaaaagatactttatcgcctccacgaccaatactaa
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