Algoriphagus sp. NBT04N3: GYM62_11435
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Entry
GYM62_11435 CDS
T09623
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYM62_11435 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
algo03400
]
GYM62_11435 (ruvA)
DNA repair and recombination proteins [BR:
algo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYM62_11435 (ruvA)
RecFOR pathway proteins
GYM62_11435 (ruvA)
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
5_3_exonuc
UBA_7
HHH_3
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QYH39364
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All DBs
Position
2645054..2645650
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AA seq
198 aa
AA seq
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MIDYLRGKLVFKDPTYVIIDVGGIGYHVKISLQTYSKIKDEEQIRLLTFLHIKEDAHTLY
GFKEEDEKRLFLLLISINGVGPNTGLMILSSLSSEEIEQAILAGDVATIQHVKGIGAKTA
QRIILELKDKVSKSGSDVSTSSLGFLKSSNKLREEALQALITLGFPKAAAEKNITQVLKK
TTGEISLEDLIKASLKTT
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgatagattatttgagaggaaaattggttttcaaagaccctacctatgtgatcattgac
gtaggaggaattggatatcatgtcaaaatttcccttcagacatacagtaaaatcaaggat
gaggagcaaatcaggctcctcacctttttacatattaaggaagatgctcacacactctac
ggatttaaagaggaggatgaaaagcgtctttttttattgctgatttcgatcaacggagta
ggaccaaataccggcttaatgattctgtcatctttgagctccgaagaaatcgaacaggca
atattagctggtgatgtagctactattcaacatgtcaaaggaattggtgctaagaccgct
cagcggattattcttgagttgaaagacaaagtcagcaaatccggatcagatgtttctact
agttctttgggatttttaaaatcaagcaataaattacgtgaggaggcgttacaagcctta
attactttaggttttccaaaagcggctgcggagaaaaatatcactcaggtgctcaaaaaa
accactggagaaatttctttagaagatttaattaaagcatctttaaagaccacataa
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