Algoriphagus sp. NBT04N3: GYM62_11615
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Entry
GYM62_11615 CDS
T09623
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
algo
Algoriphagus sp. NBT04N3
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GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA_2
Mg_chelatase
HTH_50
AAA
HTH_30
HTH_28
bpMoxR
MCM
AAA_19
AAA_7
HTH_29
HTH_7
HTH_23
nSTAND3
HTH_1
Glycos_transf_1
AAA_16
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QYH39397
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Position
2690054..2691436
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AA seq
460 aa
AA seq
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MENQDLGKILIIDDNEDLLFAAKMLLKKHAKEVTIEKDPRRIPFLINNNNYDVILLDMNF
REDTTSGKEGFFWLSQIKEIDPKAVVILITAFGDVEMAVQALKEGATDFILKPWQNEKLL
ATLSAAVRLKESYNEVDKLQKKQKQLQSDLKKPYTDIIGSSASMKNIFSIIDKVAQTDAN
VLILGENGTGKELIARAIHERSLRKDEIFVGVDMGAITETLFESELFGHKRGAFTDAKDD
RAGRFEIADKGTLFLDEIGNLSMPLQSKLLTVLQKREVTRIGTNKAIPVDIRLICATNMH
VHEMVMENTFRQDLLYRINTVEIFLPPLRERQDDIPQLANHFLKQYSQKYRKEFSSFTSS
AMELLQRYPWPGNIRELQHAIERAIIMAEGNQLDSRDFFFLSAKPASEKAPVSNTLNLDD
MERSTIQRAIDKNGGNISKAAKELGLTRASLYRRLEKYGL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaagatcttggcaaaatattaattattgacgataacgaggacttattattt
gctgccaaaatgcttttaaaaaagcatgcgaaggaagtgactattgaaaaggatccgaga
agaattccatttttgatcaataataacaactacgatgtaattcttttggacatgaatttc
cgggaggacaccacttctggaaaagagggatttttctggctaagtcaaatcaaagaaata
gaccccaaagctgtcgtaattttaatcacggcatttggagatgtggaaatggctgttcag
gcactcaaagaaggtgctacagattttatcttgaagccatggcaaaatgaaaaactcttg
gccacactttctgcagcggttagattaaaagaatcttacaatgaagtagacaagcttcag
aaaaagcaaaagcagcttcagtccgatctcaaaaaaccttacacagatatcatcgggagc
agtgcttcgatgaaaaacatcttttccatcatagataaggtagcacaaactgatgccaat
gtcttgatcttaggcgaaaacggtactggtaaagaattgattgccagagccattcacgaa
agatctctgagaaaggacgaaatcttcgttggagtagacatgggagccatcacagaaacc
ttgtttgaatccgagcttttcggtcacaaaaggggcgcatttacggatgcaaaagatgat
agagcaggtagattcgagattgcggataaaggaaccctattcctggatgaaatcgggaat
ttatccatgcctcttcaatctaaattattgactgttttgcaaaaaagagaggtgactaga
attggaaccaacaaggccattccggttgatatccgtctcatttgtgctaccaatatgcat
gtgcatgaaatggtcatggagaatacattcagacaggatttgctatatcggatcaataca
gttgaaattttccttccgcctttgagagaaagacaggatgatataccacaattagccaat
cacttcctaaagcaatacagtcaaaagtatagaaaggagtttagcagctttacttcctct
gctatggagttacttcagcgctatccttggcctggtaatattcgggaacttcagcatgcc
atagaaagggctatcattatggcagaaggaaatcaattagactcaagagatttcttcttc
ctttctgccaaacctgcctcagaaaaagctccagtttccaacaccctgaatctggatgat
atggaaagaagtacgattcagcgtgcaattgataaaaacggaggtaatatttccaaagca
gcaaaagagctgggcttgacccgtgcatctttgtacagacgattagaaaaatatggatta
taa
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