Algoriphagus sp. NBT04N3: GYM62_12545
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Entry
GYM62_12545 CDS
T09623
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
algo02000
]
GYM62_12545
Transporters [BR:
algo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GYM62_12545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
SusD-like_2
TPR_12
BDI_1685-like_C
TPR_2
TPR_19
Motif
Other DBs
NCBI-ProteinID:
QYH39567
LinkDB
All DBs
Position
complement(2901899..2903254)
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AA seq
451 aa
AA seq
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MKNIIKNKMVGVLLGATIIVSSCSEDLLDLEPVDSLSSNSVFVNQQGANAAVLGMYSGLA
GGNNLGFRMNVVGDIASNDVSHTGSFNTWRDLDLKNWDAVNGEIGSIWASAYNNINRANN
IIQNVDGIDMAQALKDQYKGEALFVRALNHFNLTNYFGDVPLVLRATAAPIDESYFVSRD
PKSTVLQRVQQDLTEAISLLPASYSSNNNTRHRATRGAAQALLARLYLYTGNYAEAAAAA
SSVISNTTYSLVSFENMVASKGTQEAIFELFFDANNQNPVTFWYGRDNGGRYEFGVTPSL
WNAYQPGDLRRASSIREEAPGVFVNFKYRDNTTGTDGVHVIRLAEMYLIRAEARVRTGDF
AGAAADLQVIRRRAFNDQTIVVTLPNDVEQAIDIILAERRLEFAFEGHRWHDLVRTGRAV
TEFELPAFRTLLPIPLNARDVNPNLTQNPGY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatataataaaaaataaaatggtaggtgtgcttctaggagcaaccataatcgta
agttcctgctctgaagatttattagatcttgagccagttgattctctttcttccaactct
gtatttgtcaatcagcaaggcgcaaatgctgcagtattaggaatgtatagtggtctagca
ggtggaaataatctaggcttcagaatgaatgtagtaggtgatattgcgtcaaatgatgtc
tcacacactggatcattcaatacctggagagaccttgatttaaaaaactgggatgctgtc
aatggtgaaatcggttctatctgggcatctgcctataataatatcaaccgtgccaataat
attatccaaaatgtagatggaatcgacatggctcaggctctaaaagatcaatacaaaggt
gaagctttatttgtaagagcattaaatcatttcaacttgaccaattattttggtgatgtt
cctttggttttgagagctaccgcagctcctatagatgaaagctactttgtttccagagat
ccaaaatctacggtattgcaaagagttcagcaagatctgacagaggcaattagtttactt
cctgcttcttacagctccaataataacacaagacatagagctacaagaggagctgctcaa
gctttattggcgagactgtacctttatacaggaaactatgctgaagctgcagcggcagca
agttccgtaatttcaaacacaacatattcgttggtttcatttgagaacatggttgcatcc
aaaggtactcaagaagcgatttttgaattattctttgatgcaaacaaccaaaatccagtt
accttttggtacgggcgtgataatggtgggagatatgaatttggagtaactccaagtctt
tggaatgcatatcagccaggtgatttgagaagagcatcctccattagagaagaagctcca
ggagtatttgtaaactttaagtacagagataatactacaggtactgatggagttcatgta
attcgtttggcagagatgtacttaatcagagctgaagctagagttagaacaggggacttt
gcaggagctgctgccgacctacaggttatcagaagaagagccttcaatgatcaaaccatc
gtagtcacccttccgaatgatgtagaacaggcaatcgatataattcttgcagaaagaaga
ttggagtttgcttttgaaggacatagatggcatgacttagtaagaactggaagagcggtt
accgaatttgaattgccagcttttagaacattgttgccaattcctttaaatgctagagat
gtaaaccctaatttaactcaaaatccgggttattaa
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