Algoriphagus sp. NBT04N3: GYM62_13105 Help Entry GYM62_13105       CDS       T09623                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism algo  Algoriphagus sp. NBT04N3 Pathway algo02020   Two-component system algo02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:algo00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     GYM62_13105 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     GYM62_13105 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:algo03021]     GYM62_13105 (rpoN) Transcription machinery [BR:algo03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      GYM62_13105 (rpoN) BRITE hierarchy Motif Pfam:  Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_12 MarR SF3b1 HTH_IclR Motif Other DBs NCBI-ProteinID:  QYH39676 LinkDB All DBs Position complement(3045473..3046927) Genome browser AA seq 484 aa AA seqDB search MQKLNLSQSLSQKLSPQQIQFIKLLQVPTAELDARIEEELEINPALEEGKEEKEDTSQDE YEDSYEEDLGSDDRDLNLDDYLDDEYGGYKMQGDGNYNSDEEDREIPISSQASLHELLIQ QLNFLKLDERQKIIGQQLIGSIENDGYIRRDLEAIINDLAFSQNIETDIDELEEILRKIQ TFDPAGIASRNLQECLILQLERKEHPEDPTVQHALRIMHDCFEEFTKKHYSKIQRKCDLN EDEIKDAVNLITKLNPKPGGVSEGLVRTQYIIPDFILTNNSGKLEISLNSKNAPELRISR SYADMFDAYDKSDKKDKKLKETVTFVKQKLDAAKWFIDAIKQRQNTLLRTMEAILQYQKE FFLDGDETNLRPMILKDIAEKIDMDISTVSRVANSKSIQTEFGVYPLKYFFSEGIATDSG EDVSNREVKSVLQAMVDEEDKKRPLSDDKLVKMLNKKGYNIARRTVAKYREQLQIPVARL RKEL NT seq 1455 nt NT seq  +upstreamnt  +downstreamnt atgcaaaagctaaatcttagccagtcactttcacagaagctttctccacagcagatacag tttatcaagctattgcaggttcctacagcagaattggatgctagaattgaggaggaattg gagattaacccagcactggaagaaggaaaggaggagaaagaggatacttctcaagatgaa tatgaagactcctatgaggaggaccttggatctgatgacagagaccttaacctggatgac tatctagacgatgagtatggcggatacaaaatgcagggtgatggaaattataattcagat gaagaagatcgtgagattcctatttcttctcaggcttctttgcacgaattattaattcag cagctcaattttttaaagttggatgagagacaaaaaataatcgggcaacagcttattgga agtattgaaaatgatggatacatccgaagggatcttgaggccattatcaatgatttggct tttagccaaaatatagagacggatatagatgagttagaggaaattctgcgaaagattcaa acttttgatcctgcgggaattgcttcaagaaaccttcaggaatgcctcattctgcaatta gaaagaaaagagcatcctgaggatcccacagttcagcatgccttacgaatcatgcatgat tgctttgaggaatttaccaaaaagcattactctaaaatccagcggaaatgcgatttgaat gaagacgagatcaaggatgccgtcaacttgattactaagttaaatcctaagccgggagga gtttccgaaggattagttcgtacgcaatacatcataccggattttattttgaccaataat tcagggaaattggaaataagtttaaactccaagaacgctcctgagttaagaatatccaga tcatatgcggatatgtttgatgcctatgataaatctgataaaaaggacaaaaaactgaag gagacagtcacttttgttaagcagaaattagatgctgctaaatggtttatcgatgcgatc aaacaacgtcaaaatactttattgagaaccatggaggctattttacaatatcaaaaagaa ttctttttggatggggatgaaacgaacttacgtccgatgattctgaaagatatagccgaa aaaatagacatggatatctcaactgtttccagagttgccaacagtaaatccattcaaaca gaatttggcgtttatcctttaaagtatttcttttctgaaggtatcgctactgatagtggg gaagatgtcagcaatagggaggtgaaatctgtattgcaggctatggtagatgaagaggat aaaaagagaccgctttcagatgataagcttgtgaaaatgctgaataaaaaaggatataat atagccagaagaactgttgccaaatacagagagcaattacagattccagtggcgagactt agaaaagaactgtag

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