Algoriphagus sp. NBT04N3: GYM62_13315
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Entry
GYM62_13315 CDS
T09623
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
algo03000
]
GYM62_13315
Transcription factors [BR:
algo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GYM62_13315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
SBP_bac_1
P22_Cro
HTH_5
SBP_bac_11
PBP2_Ca3427_like
NYN_YacP
I-HmuI_NUMOD-like
MarR
Cro
Motif
Other DBs
NCBI-ProteinID:
QYH39715
LinkDB
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Position
3090776..3091705
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AA seq
309 aa
AA seq
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MNISLNQLKALSSIAHFQSITKAAKALNMTQPAVSVQLKNLQENFDVPLTEIIGKKIHIT
EFGQELVDMSERIFAEMDQIEQRMMELKGLLAGKIRISAVSTGKYIIPYLMADFMKIHPH
VEINLEVSNRFKVLAHLEENSTDLALVSIAPDEMNLESIVIAENKWYLACSPKKAEEYQQ
LISENKWDKIPFILRESGSGTRVMMEKFFHDRDINTNSKMELATNEAVKQAIMAGLGASI
LSSYSMVNEIKEKRIHILKFEGLPIVADWKLVWLKQKKHAPAVKAFIRWVSENKRKIFQD
HFEQLNELD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctctctgaatcagctgaaagcattaagtagcattgctcacttccaaagcatt
accaaggcagcaaaggctttgaatatgactcagccggctgtttcggtacagctgaaaaac
ttacaggagaattttgatgtaccgctcactgaaatcattggcaagaaaatccacatcaca
gaatttggtcaggaattagtcgatatgtcggagcggattttcgctgaaatggatcagatc
gaacagcgaatgatggaattaaaaggcttattggccggaaaaatcagaatctccgctgta
tcaacagggaaatacattatcccctatctgatggctgatttcatgaaaatccatcctcac
gttgaaatcaatctggaggtatcaaatcgctttaaagtgttggctcatttggaagagaac
agcactgacttggcactagtatcgattgctccggatgaaatgaaccttgaaagcatcgtc
atcgcggaaaataaatggtatttagcctgctcgccaaaaaaagccgaagaataccaacaa
ttaatcagtgaaaataaatgggataaaattccctttattttaagagaaagcggatctgga
acaagagtgatgatggagaaattttttcatgacagggatatcaataccaacagtaaaatg
gaattagctaccaacgaggcagtgaaacaagccatcatggctgggttgggtgcttccatt
ctttcctcctactccatggtcaacgaaatcaaagaaaaacgcatccatattctgaaattc
gagggacttcctatcgtagctgactggaaattggtttggttgaagcaaaaaaagcatgcc
cctgcagtgaaggcttttatccgctgggtaagtgaaaataagcggaaaattttccaagat
cactttgagcagttgaacgaattggactaa
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