Algoriphagus sp. NBT04N3: GYM62_13370
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Entry
GYM62_13370 CDS
T09623
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo03030
DNA replication
algo03430
Mismatch repair
algo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYM62_13370
03430 Mismatch repair
GYM62_13370
03440 Homologous recombination
GYM62_13370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
algo03032
]
GYM62_13370
03400 DNA repair and recombination proteins [BR:
algo03400
]
GYM62_13370
Enzymes [BR:
algo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYM62_13370
DNA replication proteins [BR:
algo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GYM62_13370
DNA repair and recombination proteins [BR:
algo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GYM62_13370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
DNA_pol3_delta_C
RuvB_N
DNA_pol3_gamma3
AAA_14
RCF1-5-like_lid
AAA_5
AAA_30
AAA_2
Rad17
AAA_18
AAA_24
AAA_7
RNA_helicase
AAA_19
Mg_chelatase
AAA_assoc_2
AAA_16
ResIII
TsaE
nSTAND3
iSTAND
Pribosyl_synth
AAA_33
DUF6587
QueC
Motif
Other DBs
NCBI-ProteinID:
QYH39726
LinkDB
All DBs
Position
complement(3102893..3104620)
Genome browser
AA seq
575 aa
AA seq
DB search
MENFVVSARKYRPANFKSVVGQQHITTTLQNAIKNNHLAQAFLFCGPRGVGKTTCARILA
KTINCENRGEDQEACGTCESCVSFQNNSSFNIYELDAASNNSVDDIRNLVDQVRYAPQKG
QYKVYIIDEVHMLSNQAFNAFLKTLEEPPKYAIFILATTEKHKIIPTILSRCQIFDFNRI
QIKHIADHLKHIADKESVSYEDEALRLIATKADGALRDALSIFDLIVTYSAGQKVTYKET
ISNLHILDYDYYFKVVDALLEGDISQSLLIFDEILKKGFDGHNFIVGLCEHFRDLLVVKD
PVTIDLIEVSENVKERYLQQTQAASQSFLLSALNVANQCDIHYKTSKNQRLHVELALMKM
AKLPQALNLAALAVEESKKKSLNNGKAVEEKPSEIPLSADSIKGKTTPVQKTISIPTSLS
QTKKLVKEFEQKNTQAAKQAEDLVEFVSTVETTKPLTQELLDQHLPQVLEHFKKQGKSLE
LAILNQPIKVKENEMILEVMGHVQEERAHSMRQELMTLIRNLTGAGKFQLSLEVKEEIET
AKNKLYTSSDKFNYLLEKHPALNEFRKKFGLETDF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttcgtcgtttcggcaagaaaatatagaccggctaattttaaaagtgtcgtg
gggcaacagcatatcaccactacactacaaaatgcgatcaagaataatcaccttgctcag
gcttttcttttctgtggacctagaggggttggtaaaactacctgtgcacgaatacttgcc
aaaacaatcaactgcgaaaatagaggggaagaccaagaagcttgcggaacctgcgaatcc
tgtgtttctttccaaaacaactcatccttcaacatctatgagctagatgcagcatccaat
aactcagtcgatgatattcgaaatcttgtagatcaggttaggtatgctcctcaaaagggc
cagtataaagtctatatcattgatgaggttcacatgctctccaatcaggccttcaatgca
tttttgaagactttggaggaacctcctaagtatgctattttcattttagcaactacagaa
aagcataaaattatacctactattctttcccgctgtcagatttttgatttcaatagaatt
caaatcaagcacattgcggatcatttgaagcatatcgcggacaaagaaagtgtgagctat
gaggatgaagcgcttcgcctgatcgccaccaaagcggatggggcattgagagatgcactt
tccatatttgacctgattgtgacctattctgcaggtcaaaaagtaacttacaaagagacc
atttctaaccttcacattttggattacgactactatttcaaagtagtagatgccttattg
gaaggagatatttcccagtctttgttgatttttgatgaaattcttaaaaaaggcttcgat
gggcataatttcatcgttggactttgcgagcatttcagggatttgttggtagtgaaagat
ccagtgactatagatttgattgaagtttccgaaaatgtcaaggagcgataccttcaacaa
acccaagcagccagtcagtcttttttactttctgctttgaatgttgccaaccaatgtgac
attcattataaaaccagtaaaaatcagcgccttcatgttgagttggctttgatgaaaatg
gccaaattacctcaggcattgaacctggctgcattggcagtggaggaatcaaaaaaaaaa
agcctgaataacggaaaagcggtagaggaaaaaccctccgaaatcccgttaagtgctgat
tctattaaggggaaaactacccctgttcagaaaacaatttcgattccaaccagtctctcc
cagaccaaaaaactggtcaaagagtttgaacaaaaaaatacccaggctgcaaaacaggca
gaggatttggtagagtttgtttctaccgtggagactactaagcctttgactcaggaactc
ctagatcagcatttgcctcaggtcttagaacatttcaaaaagcaagggaaaagtctggaa
ttagccattctcaatcaaccaatcaaggtcaaggaaaatgaaatgatcttggaagtgatg
ggtcatgttcaggaagaaagagctcattccatgcgtcaggagttaatgaccctgataaga
aacttaactggtgcaggaaaattccagctatccttagaagtcaaggaagaaatcgaaact
gccaaaaataaactttatacgagttcggataaattcaattatttgttggaaaagcatcca
gctttaaatgagttcagaaagaagtttggactggagactgatttttaa
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