Algoriphagus sp. NBT04N3: GYM62_13890
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Entry
GYM62_13890 CDS
T09623
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
algo03400
]
GYM62_13890 (sbcD)
DNA repair and recombination proteins [BR:
algo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYM62_13890 (sbcD)
Archaeal homologous recombinant proteins
GYM62_13890 (sbcD)
BRITE hierarchy
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QYH39819
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Position
3212467..3213702
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AA seq
411 aa
AA seq
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MLKILHTADWHLGKRLQEYTRIEEQKLVLDEIIQIADQEKVDLVLLAGDIFDSFNPSHEA
VELLYKSLRKLSNNGHRPIFAISGNHDSNQFIEAPDPLAREMGIFFYSRFDSVIPKGKIE
SGLEIIHSESGFVELSIPGHSIPIRLILAPYATELSLKTYLGEGDREKEFRAILSEKWSN
LADRYCDENGINLFMGHFFFIQEGQPIPTNAEPESERPILHVGGTQALFTQQIPPQMQYA
ALGHLHRYHAVSTKPCPVVYASSPLAYSFSEADQEKKVVIIEAEAGKPVSYTPIELKKGR
PLYRVKFEQLQEALLWLEKHPYCFVELTYVTEQSIDASTRKALLKAHDGIVNLIPQIKNP
RAQEDLSLKAEDLEKDMLALFQLYYQNSKGLEANEELMEIFKEIISTEENS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaatactccataccgctgattggcacttagggaaacgactacaagaatacacc
cggatagaagaacagaaattggtattggatgaaatcatccaaatcgctgatcaggaaaaa
gttgatttggttttgcttgccggtgatattttcgactccttcaatccatctcatgaggcg
gtagaattgctgtacaaaagtctccgcaaactttccaacaatggccataggcccattttt
gccatatccggaaatcatgacagcaatcaatttatagaagctcctgacccgctagcccgg
gaaatgggtatatttttttacagccgctttgattcagtcattccaaaaggaaaaatcgaa
tctggactagaaattattcattctgaatctggctttgtggaactttccataccgggtcat
tccatcccaatcagattgattttggctccatatgcaactgaactcagcctcaaaacctac
ttgggagaaggcgatagagagaaggagttcagagctatcctaagcgaaaaatggagcaat
cttgcagatcgctactgtgatgaaaatggaatcaatttattcatgggtcacttctttttc
atccaagagggtcagcctattcctaccaatgctgagcccgaatcagagcgtcccattttg
cacgtaggaggcacgcaggcattattcacccagcaaatacctccccaaatgcaatatgcc
gctttaggacatttgcaccgctatcatgcagtgagcacaaagccttgtcctgtggtctat
gctagttctccattagcctactctttttcagaagcagatcaggaaaaaaaggtggtaatt
attgaggcggaagccggcaagccggttagctacacacctatagaattgaaaaaaggccgc
ccactttatcgggtcaagtttgaacaattgcaagaagccttactttggctggaaaaacac
ccttattgctttgtggagctaacctacgtaaccgaacaatccatcgatgccagcacccga
aaagcacttttgaaagcacatgacggaatagtcaatctgattccccaaatcaagaaccct
agagcacaagaagatctcagtctcaaggcggaggacttagaaaaagatatgttggcctta
tttcaactatattatcaaaacagcaagggactggaagccaatgaagagctcatggaaatt
tttaaagaaatcatctcaacagaagaaaattcatga
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