Entry |
|
Symbol |
sbcD
|
Name |
(GenBank) exonuclease subunit SbcD
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
algo Algoriphagus sp. NBT04N3
|
Brite |
KEGG Orthology (KO) [BR:algo00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:algo03400]
GYM62_13890 (sbcD)
DNA repair and recombination proteins [BR:algo03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYM62_13890 (sbcD)
Archaeal homologous recombinant proteins
GYM62_13890 (sbcD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3212467..3213702
|
AA seq |
411 aa
MLKILHTADWHLGKRLQEYTRIEEQKLVLDEIIQIADQEKVDLVLLAGDIFDSFNPSHEA
VELLYKSLRKLSNNGHRPIFAISGNHDSNQFIEAPDPLAREMGIFFYSRFDSVIPKGKIE
SGLEIIHSESGFVELSIPGHSIPIRLILAPYATELSLKTYLGEGDREKEFRAILSEKWSN
LADRYCDENGINLFMGHFFFIQEGQPIPTNAEPESERPILHVGGTQALFTQQIPPQMQYA
ALGHLHRYHAVSTKPCPVVYASSPLAYSFSEADQEKKVVIIEAEAGKPVSYTPIELKKGR
PLYRVKFEQLQEALLWLEKHPYCFVELTYVTEQSIDASTRKALLKAHDGIVNLIPQIKNP
RAQEDLSLKAEDLEKDMLALFQLYYQNSKGLEANEELMEIFKEIISTEENS |
NT seq |
1236 nt +upstreamnt +downstreamnt
atgctaaaaatactccataccgctgattggcacttagggaaacgactacaagaatacacc
cggatagaagaacagaaattggtattggatgaaatcatccaaatcgctgatcaggaaaaa
gttgatttggttttgcttgccggtgatattttcgactccttcaatccatctcatgaggcg
gtagaattgctgtacaaaagtctccgcaaactttccaacaatggccataggcccattttt
gccatatccggaaatcatgacagcaatcaatttatagaagctcctgacccgctagcccgg
gaaatgggtatatttttttacagccgctttgattcagtcattccaaaaggaaaaatcgaa
tctggactagaaattattcattctgaatctggctttgtggaactttccataccgggtcat
tccatcccaatcagattgattttggctccatatgcaactgaactcagcctcaaaacctac
ttgggagaaggcgatagagagaaggagttcagagctatcctaagcgaaaaatggagcaat
cttgcagatcgctactgtgatgaaaatggaatcaatttattcatgggtcacttctttttc
atccaagagggtcagcctattcctaccaatgctgagcccgaatcagagcgtcccattttg
cacgtaggaggcacgcaggcattattcacccagcaaatacctccccaaatgcaatatgcc
gctttaggacatttgcaccgctatcatgcagtgagcacaaagccttgtcctgtggtctat
gctagttctccattagcctactctttttcagaagcagatcaggaaaaaaaggtggtaatt
attgaggcggaagccggcaagccggttagctacacacctatagaattgaaaaaaggccgc
ccactttatcgggtcaagtttgaacaattgcaagaagccttactttggctggaaaaacac
ccttattgctttgtggagctaacctacgtaaccgaacaatccatcgatgccagcacccga
aaagcacttttgaaagcacatgacggaatagtcaatctgattccccaaatcaagaaccct
agagcacaagaagatctcagtctcaaggcggaggacttagaaaaagatatgttggcctta
tttcaactatattatcaaaacagcaagggactggaagccaatgaagagctcatggaaatt
tttaaagaaatcatctcaacagaagaaaattcatga |