KEGG   Algoriphagus sp. NBT04N3: GYM62_13890
Entry
GYM62_13890       CDS       T09623                                 
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
algo  Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:algo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:algo03400]
    GYM62_13890 (sbcD)
DNA repair and recombination proteins [BR:algo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GYM62_13890 (sbcD)
    Archaeal homologous recombinant proteins
     GYM62_13890 (sbcD)
Motif
Pfam: Metallophos Metallophos_2
Other DBs
NCBI-ProteinID: QYH39819
LinkDB
Position
3212467..3213702
AA seq 411 aa
MLKILHTADWHLGKRLQEYTRIEEQKLVLDEIIQIADQEKVDLVLLAGDIFDSFNPSHEA
VELLYKSLRKLSNNGHRPIFAISGNHDSNQFIEAPDPLAREMGIFFYSRFDSVIPKGKIE
SGLEIIHSESGFVELSIPGHSIPIRLILAPYATELSLKTYLGEGDREKEFRAILSEKWSN
LADRYCDENGINLFMGHFFFIQEGQPIPTNAEPESERPILHVGGTQALFTQQIPPQMQYA
ALGHLHRYHAVSTKPCPVVYASSPLAYSFSEADQEKKVVIIEAEAGKPVSYTPIELKKGR
PLYRVKFEQLQEALLWLEKHPYCFVELTYVTEQSIDASTRKALLKAHDGIVNLIPQIKNP
RAQEDLSLKAEDLEKDMLALFQLYYQNSKGLEANEELMEIFKEIISTEENS
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgctaaaaatactccataccgctgattggcacttagggaaacgactacaagaatacacc
cggatagaagaacagaaattggtattggatgaaatcatccaaatcgctgatcaggaaaaa
gttgatttggttttgcttgccggtgatattttcgactccttcaatccatctcatgaggcg
gtagaattgctgtacaaaagtctccgcaaactttccaacaatggccataggcccattttt
gccatatccggaaatcatgacagcaatcaatttatagaagctcctgacccgctagcccgg
gaaatgggtatatttttttacagccgctttgattcagtcattccaaaaggaaaaatcgaa
tctggactagaaattattcattctgaatctggctttgtggaactttccataccgggtcat
tccatcccaatcagattgattttggctccatatgcaactgaactcagcctcaaaacctac
ttgggagaaggcgatagagagaaggagttcagagctatcctaagcgaaaaatggagcaat
cttgcagatcgctactgtgatgaaaatggaatcaatttattcatgggtcacttctttttc
atccaagagggtcagcctattcctaccaatgctgagcccgaatcagagcgtcccattttg
cacgtaggaggcacgcaggcattattcacccagcaaatacctccccaaatgcaatatgcc
gctttaggacatttgcaccgctatcatgcagtgagcacaaagccttgtcctgtggtctat
gctagttctccattagcctactctttttcagaagcagatcaggaaaaaaaggtggtaatt
attgaggcggaagccggcaagccggttagctacacacctatagaattgaaaaaaggccgc
ccactttatcgggtcaagtttgaacaattgcaagaagccttactttggctggaaaaacac
ccttattgctttgtggagctaacctacgtaaccgaacaatccatcgatgccagcacccga
aaagcacttttgaaagcacatgacggaatagtcaatctgattccccaaatcaagaaccct
agagcacaagaagatctcagtctcaaggcggaggacttagaaaaagatatgttggcctta
tttcaactatattatcaaaacagcaagggactggaagccaatgaagagctcatggaaatt
tttaaagaaatcatctcaacagaagaaaattcatga

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