KEGG   Algoriphagus sp. NBT04N3: GYM62_14700
Entry
GYM62_14700       CDS       T09623                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
algo  Algoriphagus sp. NBT04N3
Pathway
algo00470  D-Amino acid metabolism
algo00550  Peptidoglycan biosynthesis
algo01100  Metabolic pathways
algo01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:algo00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GYM62_14700
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    GYM62_14700
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    GYM62_14700
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:algo01011]
    GYM62_14700
Enzymes [BR:algo01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     GYM62_14700
Peptidoglycan biosynthesis and degradation proteins [BR:algo01011]
 Precursor biosynthesis
  Amino acid ligase
   GYM62_14700
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp_3 ATP-grasp GARS_A
Other DBs
NCBI-ProteinID: QYH39973
LinkDB
Position
3391646..3392632
AA seq 328 aa
MKKKIALVTGGFTGESVISLKSAAVVEKTIDRDRYDVYKILIYPGDWHFVCESGEKIPVD
LNDFSISIGDEKITFDGVFNILHGSPGEDGKLAGYFDMLGIPYTTCDQLTSAITMNKGYT
KAIVQDIPELHIAQSIQLFENTEKNRKRIEGELSLPLFIKPNNGGSSIGMSKVKTWEELS
EALEKAFAEDKQVLVEEFVSGREFSVGVFRGKGEITVLPATEIVSSKEFFDFEAKYIPGV
CEEITPGRMNEEEIGRVSRVASRVYEKLNCRGAVRIDYFLEKETGKFFFIEINTVPGQTE
TSLISQQIRAIGMEVKDFYTQLIEEMFV
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaagaagaaaattgccttggtaaccggaggattcaccggtgaatccgtcatctcccta
aaaagcgctgctgttgtcgaaaaaaccatagaccgcgacaggtatgacgtgtacaaaatc
ttgatttatccaggggattggcattttgtctgcgagtctggagaaaaaatccctgttgat
ctcaatgacttcagtatttccatcggagacgaaaaaatcacctttgatggagttttcaat
attttacatggctccccgggtgaagacggcaaattggcgggatactttgatatgctggga
atcccttataccacttgcgatcagctgacttcagctatcactatgaataaaggctatacc
aaagctattgttcaagatatccccgaattacatattgcacagtccattcaactttttgaa
aatactgaaaagaatagaaagcgaattgagggagaattaagccttccactgtttatcaaa
ccgaataatggtggtagctcaatcggaatgagtaaagtcaaaacctgggaggagttatct
gaggccttggaaaaagctttcgcggaagacaaacaggtattggttgaggaatttgtatca
ggaagggagttttctgtgggagttttccgaggaaaaggcgagatcacagtacttcctgct
acggagattgtgagcagcaaggagttctttgatttcgaagcaaaatatatccctggagtt
tgcgaagaaataactccaggccgaatgaatgaggaggaaataggaagagtttcaagggtg
gcatcaagggtgtatgaaaaactcaattgcagaggagctgttcgaattgattatttcttg
gaaaaggaaaccggaaagttcttttttattgaaatcaatacggtgcctgggcaaacagaa
accagcttaatttctcagcagatccgggcaattggtatggaagtaaaggacttttatacc
cagttgattgaggagatgttcgtgtaa

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