KEGG   Algoriphagus sp. NBT04N3: GYM62_14905
Entry
GYM62_14905       CDS       T09623                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
algo  Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:algo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:algo02048]
    GYM62_14905
Enzymes [BR:algo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GYM62_14905
Prokaryotic defense system [BR:algo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GYM62_14905
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD T1RH-like_C DUF5508 SLFN-g3_helicase ParM_N
Other DBs
NCBI-ProteinID: QYH40014
LinkDB
Position
3440387..3443353
AA seq 988 aa
MSFTELNSVEYYIIRELTGVNLNSGNFGEAKPRYGTDWQFRSASDLNRSVNEVLIESDLK
EALIRLNPEIQINPNLADEVIYKLRAILISVQQVGLVKANEEFFKWMTGDKTMPFGDNNR
HVPIRLIDFEDLTNNQYTLTNQFRVHHRETKIPDIVLFINGIPVVVGEAKTPTRPGVSWL
DGASEIHQVYENSIPQLFVSNILSFATEGKELYYGGIRCPLDFWAPWRLEDEEEALAKRL
GLGEIGKEMGDLLHPKRLLDILQNFSLFSTNKKKQRMKVIPRFQQYEGANKIVERVKEGR
IKKGLIWHFQGSGKSLLMVFAAQKLRRMPELKSPTVIVLVDRTDLDTQISGTFNAADIPN
VEPTDSIRDLQKLLEQDTRKIIISMIHKFRDAKPNMNTRENIIVLVDEAHRTQEGDLGRQ
MRSALPNAFLFGLTGTPVNKADKNTFWAFGSEEDEGGYLSRYTFQDSIRDGATLPLHFEP
RLVDVHVDKETIDKLFENFKEEAALTDEEADALNKKSAKMAAFLKSPERVKKIVADISVH
FKEKVDPHGFKAMIVTPDRYACIQYKEELDKYFPEEASRVVISTSANDEYDFKQKWAVDK
SQQERIVDEYNDPISDLKFLIVTAKLLTGFDAPILQTMYLDKSLKDHTLLQAICRTNRLF
PQKYFGRIVDYFGVFDDTAKALEFDEKSVLQIITNLSELREKLPQAVADTLAHFTGVDRT
IVGFEGLEIAQNAIKTDEKKDAFAKDFKFLTKLWESLSPDNILNLYQQDYKWLSQVFESV
RPASDTIGKLLWITLGAQTTKLIHENIHVGDIHHLEEFILDADVIEDIFNNPDPKNAKKL
EKILVKRFKKHEGNPKFKKLSELLEELRDRAEKGLITSIEFVKELCKIAKETVQAEKELA
EEIQEKSPKAALTELFLELKTEETPAVVERIVNDIDQIVRVVSFPGWQKTTGGEREVQKS
LRKALLKYQLHKDQVLFDRAYGYIKEYY
NT seq 2967 nt   +upstreamnt  +downstreamnt
atgtcctttaccgaactcaatagcgtagagtattatatcatccgtgaactaaccggggta
aatctcaattcaggaaactttggcgaagctaagccacggtatgggacggattggcaattt
agatcagcctcagatctaaatcgttcggtgaatgaagtcctgatagaatcggacctaaaa
gaggctttgatccggttgaatccagagattcagatcaatccgaatttggcagatgaggta
atttataagctgagggcaattttgatctcggttcagcaggtcggtttggttaaggccaat
gaggagtttttcaagtggatgaccggggataagaccatgccatttggagataacaaccga
catgtacccatccgattgatcgattttgaggacttgacgaataaccaatatacccttacc
aatcagtttcgggttcaccaccgggaaaccaaaatcccggatatcgtccttttcattaat
ggtattccggtggtagtcggggaagcaaaaacacccacacggcccggcgtaagttggtta
gatggggcgagcgaaatccatcaagtgtatgagaattccataccccagctttttgtgtcc
aatatcctctctttcgcaacagaaggtaaggaactttattatggaggtatccgatgcccc
ttggatttttgggcaccatggaggttggaagatgaggaggaagctttagcaaaaagactt
ggactaggtgaaatcggaaaagagatgggggatttactacaccccaaacgcctgctggat
attcttcaaaatttctctctgttcagcaccaataagaagaaacagcggatgaaagtaatc
cctcgattccaacaatatgagggagccaataaaatagtagaaagggtaaaagaaggccgg
ataaagaagggattgatttggcactttcaaggttctggcaaatccttgttgatggttttt
gctgctcagaaacttcgaagaatgccggaattgaagagtccgacagttattgtattggtt
gaccgaaccgatttggatacccaaatctccggcactttcaatgcagcagatattcccaat
gtggaaccaacggatagtatccgggatctgcaaaaattgctggagcaagacacccggaaa
atcatcatttcgatgattcataagtttcgggacgccaagcccaatatgaatacaagggag
aatatcattgtattagtggatgaggcccaccgcacccaagaaggtgatttgggtcgtcaa
atgcgatcggcactacctaatgcctttctctttggacttactggtactccagtgaataag
gccgacaaaaacaccttttgggcatttggttcggaggaagatgaaggtggctatttgtct
cgatacacatttcaagattcaattcgggacggagcaacccttccacttcacttcgaacct
cgcttggttgatgtccacgtagataaggaaacgatcgataaactttttgaaaattttaag
gaagaggccgcactgactgatgaggaagctgacgctttgaataagaaatctgcgaagatg
gcggcgttcttgaaatcacccgagagagtcaaaaagattgtagctgatatttcggttcat
ttcaaagaaaaagtcgatccgcatggattcaaggccatgatcgtgactcctgatcgatat
gcctgtatccaatacaaagaagaattggataaatactttccggaggaagcaagtagagta
gtgatttccacctctgccaatgatgagtatgactttaagcagaaatgggcagtggacaaa
tcccaacaagaaaggattgtcgatgagtataatgatccaatttccgacttgaaatttttg
attgttacggccaagcttcttactggatttgatgcaccaatcctccaaaccatgtatttg
gacaagtccctaaaggaccatactcttttacaggcgatatgtcgaacaaaccgacttttt
ccgcaaaagtattttggtaggatcgtggattactttggggtttttgatgacacggccaaa
gcattggagtttgacgaaaaatccgtgcttcaaatcatcaccaacctttcagaacttcga
gaaaaattacctcaagcagtggcagataccttggctcatttcacaggagttgatcggacc
attgtgggttttgagggattggaaatagcccaaaatgccatcaagactgatgagaaaaag
gatgcttttgccaaggattttaaattcctaaccaagctttgggagtccctttcaccagac
aatatcctcaacctttaccaacaggattacaaatggctttctcaggtatttgaatctgtg
aggccagcttctgacaccatcggaaagttactttggattacgcttggtgcgcaaaccacc
aaattgattcatgaaaacatacatgtgggtgatatacaccacttggaagagtttatccta
gatgcggatgttatcgaggacatttttaacaatcccgatcctaaaaatgccaagaaactt
gaaaaaatcttggtcaaacgattcaagaaacatgaaggaaatcccaagttcaaaaagctc
agtgagctactcgaagaactgcgggaccgggctgaaaaggggttgatcacatccatagaa
ttcgtcaaggaactttgtaaaatcgcaaaagagacagttcaagcggaaaaggaattagct
gaggaaattcaagaaaaatctcccaaggcagcattaaccgaattattccttgaattgaaa
acagaagagactcctgcggtggtcgagcggatcgtcaatgacatcgatcaaatcgtaagg
gtggtaagtttccccggttggcagaaaactacaggaggagagcgagaggtccaaaaatct
cttcgtaaagcattactgaaataccaacttcataaggaccaagtcctttttgaccgggct
tatgggtatatcaaggagtactattaa

DBGET integrated database retrieval system