Algoriphagus sp. NBT04N3: GYM62_16100
Help
Entry
GYM62_16100 CDS
T09623
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo00550
Peptidoglycan biosynthesis
algo01100
Metabolic pathways
algo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GYM62_16100
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GYM62_16100
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
algo01011
]
GYM62_16100
Enzymes [BR:
algo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GYM62_16100
Peptidoglycan biosynthesis and degradation proteins [BR:
algo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GYM62_16100
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QYH40238
LinkDB
All DBs
Position
3680167..3681969
Genome browser
AA seq
600 aa
AA seq
DB search
MNDQRPVVILIFIFLIGAVLLTKLFMIQVVDDSFMKKAERNAIQRVVDHPYRGLIYDRNG
KLLVYNNPIFDLMVVPKEFQVKDTTRFLELFGITKEHLIESYNAARKYSWVKPSPMIKQI
STTDFAKIQDFLIDYPGLFIMTRSVRSYPEPIAAHALGYIGEISAGQLERDTLKYYSQGD
YVGLSGIERYYEKELRGVKGVKYKMVNVRGIDKGPFKDGEYDTASVAGINLTSTIDRELQ
MYGEMLMQGKTGSVVAIEPKTGEILAMISAPFYDPNQLTGSDFGKTYTRLNRLETKPLFN
RPIMAMYPPGSIFKIVQSLIGLQDGILVPETTFACNRSLVACHNHPSPVNLFGAIRNSCN
PYYHQAFRKIINREISSNTFKDTEIGLNDWREKVMKFGLGSPLGVDMVGEKGGDVPSSKL
YNRVYGEGRWKYSTIYSLSIGQGELQVTPLQMANLAAIFANKGYYYTPHLIKAVDGDPSK
IPAQYRYKNEVGVDARHFDLIQNAMAEALYGTANRAVIKDLVIAGKTGTAQNPHGEDHSV
FVAFAPKDDPKIAIAVYVENAGWGGRAAASTASLMIEKYIKGEITRPALQEYVLAGNFIY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcagaggcctgtagttattcttatcttcattttcctgattggtgcagtttta
ttgacaaaactgttcatgatacaggtggtggatgacagctttatgaaaaaggctgaacgg
aatgctattcagcgtgtcgtagatcatccctatagaggtttgatttacgatagaaatggg
aaattattggtttacaataaccccattttcgacttgatggtcgttcccaaagaatttcaa
gttaaagatacaacccgatttttagagctctttggaattacaaaggagcatttaatcgaa
tcgtacaatgcagctaggaaatattcatgggtgaaaccctctcctatgatcaagcaaatt
tccactacagattttgccaagattcaggactttttgatcgattatccaggattgttcatc
atgactcgatcggtcaggtcttatccagaacctatcgctgcacatgctttgggatatatt
ggagaaatcagtgccgggcaactcgagcgtgataccttaaaatattactctcaaggagat
tatgtaggcttaagtggaattgaacgctattatgaaaaagagctccgtggcgtcaaaggg
gtgaaatacaaaatggtcaatgtacgggggatcgataaaggaccattcaaagacggtgaa
tacgataccgcttcagtagcaggaatcaatctgacttcaaccattgatcgggagcttcaa
atgtatggagaaatgctcatgcagggcaaaacaggctctgtggttgcgattgaaccaaag
actggagaaattctggcaatgatctctgctccattttatgatcctaatcaattgaccgga
tcagattttggaaaaacttacacaagactcaatcgattagagacaaagccattattcaat
cgccctattatggcgatgtatcctccgggctcaattttcaaaatcgtacaaagtttaatc
ggattgcaggatggaatcctagttcctgaaacaacctttgcttgcaatagatctctcgtt
gcttgtcacaatcacccatcgcctgtgaatttattcggagcgattcgaaactcctgtaat
ccttattatcatcaggcatttcggaaaatcatcaatagagagatttccagcaacaccttc
aaagacaccgaaatcggcttgaatgattggagagaaaaggtaatgaaatttggacttggc
tcgcctctaggagtagatatggttggtgagaaaggtggagatgtaccttccagcaaactt
tacaatagagtctatggagaaggaaggtggaaatactctaccatttattctttatctatt
ggacagggagaattacaggtaactcctttacagatggccaatttagctgcgatttttgca
aacaagggatactattatactcctcacttgatcaaagcagtagacggggatccatctaag
atacctgcccaatatagatacaaaaatgaagtgggagttgatgccagacattttgatctg
attcaaaatgcaatggcagaggcgctttatggaacagccaatagagctgtgatcaaagat
ttggtcattgccggaaaaacaggaactgctcaaaatccacatggtgaggaccactcagtt
ttcgtggcttttgcacccaaggatgatcctaaaattgccatcgcggtatatgtggaaaat
gctggctggggaggtagagcggccgcgagtactgcttccttgatgatagaaaaatatatc
aaaggagaaattaccagacctgcgctgcaggaatatgtcttggcaggaaattttatttat
taa
DBGET
integrated database retrieval system
