Algoriphagus sp. NBT04N3: GYM62_16125
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Entry
GYM62_16125 CDS
T09623
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYM62_16125 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
algo03400
]
GYM62_16125 (recO)
DNA repair and recombination proteins [BR:
algo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GYM62_16125 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GYM62_16125 (recO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QYH40243
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All DBs
Position
3685319..3686008
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AA seq
229 aa
AA seq
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MLKKTEGVVLSAIRYKESSIIVKIFSRELGLKSYIINGVRTQGTKSKAALYQPMTLLDLV
VYEKEGAGLQRISEAKIDYAYQLIPFDFVRSGILMFMAEVCSKTLYENYQNEWLFDFLKS
SLKQLDQKNIDIKHFPLVFLIQEANYLGFGPEIASDYLEESRTLPFSPEELPLVHEYLEK
LIEEGFLCDFKAGIQIRRKLLDYLLNFFSEQLDNSSPWKSMAILRQLMA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagacagagggagttgtattgagtgccattcgctacaaggaaagcagcatc
attgtcaaaatcttcagccgtgaattaggtcttaaatcctatattattaatggagtaaga
acccagggaaccaaatcaaaagcagccttatatcaacccatgacccttttggatttggtt
gtatatgaaaaagaaggagctggtttgcaaagaatatcagaggcgaaaatagattatgcc
tatcagctaatcccttttgacttcgtgcgttccggcattttgatgtttatggcggaggtt
tgttccaagactctctatgaaaactatcaaaacgagtggctcttcgactttttaaaaagt
agcctgaaacagctggaccaaaaaaatattgatatcaagcacttccccttagttttttta
attcaagaagccaactatctgggtttcggtccggaaatagcctcagattatttggaagaa
agcagaacccttccattcagtccagaagaattacccttagtccatgaatatttggaaaag
ttgattgaggaaggttttctatgcgattttaaggcaggaattcagatcaggagaaaatta
ttggactatttgctcaatttttttagcgagcaactcgataactcaagtccctggaaatca
atggctattcttaggcaacttatggcttga
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