Algoriphagus sp. NBT04N3: GYM62_16195
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Entry
GYM62_16195 CDS
T09623
Name
(GenBank) transporter substrate-binding domain-containing protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
algo01011
]
GYM62_16195
Enzymes [BR:
algo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GYM62_16195
Peptidoglycan biosynthesis and degradation proteins [BR:
algo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GYM62_16195
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Phosphonate-bd
SLT_2
Motif
Other DBs
NCBI-ProteinID:
QYH40257
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Position
complement(3716860..3718254)
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AA seq
464 aa
AA seq
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MKKGIIILFATVVILLFGVQCTFLEQQFNRTFKKETYILDLEGIKNRGFIRAAVDNNSTG
YYIYRGRRMGYEYELLRDLAKRLGVQLNLVLVSDIDKAFEYLNDGRVDLIAMNLEKSPVR
EGKATFTQALGKISTVLVSSETTPATKSWQDLESDTIFVRQGAVYKSQLCKIKDSLQVSF
TVIESPLHEETLIDQVVKGEIRYTIADQNIAQANATYYEGLNISWKVTESEEVSWVVRDN
SPKLLGEVNTWLEDKQKKFIPMLYAKYFLNSKNSYFRSTSPFSSLVGNRISVYDDLIQKG
AEELGWDWRLLASLVYKESRFDTSATSYAGAQGLLQLMPVTLERFGVENPNDPFQSLMGG
VKYLRYLDKFWMERVPETNERIKFILASYNIGHGHVEDAWRLTLKYGGNTQSWKEVAGFL
ELKSDPEYYRDPIVRSGFAKGHLAVNYVKDIMNIFESYKALVQP
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggaataatcatactattcgcaactgttgttattttattgtttggggtacag
tgtacctttctcgagcagcagttcaataggacattcaaaaaagaaacctacattttagac
cttgaagggattaaaaatagaggtttcatccgggcggcggttgataataattcgacagga
tattatatctacagagggcgtagaatgggctatgagtacgaactcttaagagacttggcc
aaaagattgggcgtgcagttaaacttggttttggtttctgatatcgataaagccttcgaa
tatctcaatgatggccgggttgatttgattgctatgaatctggaaaaaagtccagtgagg
gaggggaaagctacttttactcaggctcttggaaaaataagtaccgttctggtcagttcc
gaaactactcctgctaccaaatcctggcaggacttagagtcagacacaatatttgtgagg
cagggggcagtttataaatcccaactttgtaaaatcaaggattccttacaagtgagtttt
actgtgatagagtcacctttgcatgaagaaacattgattgatcaagttgtcaagggggag
attcgatacaccattgcagatcaaaatattgctcaagcaaatgccacttattacgaagga
ttgaatatttcgtggaaggtgaccgaatccgaagaagtttcttgggtagtgagagataat
tcgcccaagttactgggagaagtcaatacatggctagaggataaacagaagaagtttatt
cctatgctttatgctaaatattttctgaacagtaaaaacagttatttcagatctaccagt
cctttctcttccttagtaggaaatagaatttctgtttatgatgatttgatccaaaaagga
gccgaagagttaggctgggattggcgattattagcttccttggtttacaaagaatccaga
tttgatacctcagcaacctcctatgcaggtgcacaggggcttttgcaattaatgccggta
actctggaaagatttggagtggaaaaccctaatgatccatttcagtccttgatgggtgga
gtgaaatatcttcggtatttggataaattctggatggaaagagtgcccgagactaatgaa
cgaatcaaatttattttagcatcatacaacattggtcacggtcacgtagaagatgcttgg
agacttactttgaaatatggcggaaatacccaaagctggaaagaagttgcaggttttctc
gaattgaaaagtgatccggaatactatcgtgaccctatagtcagaagtggattcgccaaa
gggcatttagctgtcaactacgtcaaagacattatgaatatctttgaatcctacaaagcc
ttggttcagccttaa
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