Algoriphagus sp. NBT04N3: GYM62_16755
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Entry
GYM62_16755 CDS
T09623
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo00260
Glycine, serine and threonine metabolism
algo00460
Cyanoamino acid metabolism
algo00630
Glyoxylate and dicarboxylate metabolism
algo00670
One carbon pool by folate
algo00680
Methane metabolism
algo01100
Metabolic pathways
algo01110
Biosynthesis of secondary metabolites
algo01120
Microbial metabolism in diverse environments
algo01200
Carbon metabolism
algo01230
Biosynthesis of amino acids
algo01240
Biosynthesis of cofactors
algo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GYM62_16755
09102 Energy metabolism
00680 Methane metabolism
GYM62_16755
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GYM62_16755
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GYM62_16755
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GYM62_16755
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GYM62_16755
Enzymes [BR:
algo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GYM62_16755
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
DUF5655
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
QYH40364
LinkDB
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Position
complement(3867578..3868846)
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AA seq
422 aa
AA seq
DB search
MKRDTVVFDLIAQEEDRQKRGIELIASENFTSKQVMEAAGSVLTNKYAEGLPKKRYYGGC
EVVDEIEQIAIDRAKKLFGATWANVQPHSGAQANAAVFLACLKAGDPILGFDLSHGGHLT
HGSPVNFSGKLYDPHFYGVEEETGVIDYDKVEAKALEVKPKMIICGASAYSRDWDYERLR
DIADQVGALLLADISHPSGLIARGLLNDPLEFCHIVTTTTHKTLRGPRGGLILMREDFDN
PWGLTTPKGEIKKMSSLLDMGVFPGTQGGPLEHIIAAKAVAFEEALSDEYMTYILQVKKN
AAVMAEEFVSLGYQLISGGTDNHLMLIDLRNKNLTGKLAEETLGKVDITINKNMVPFDTK
SPFVTSGMRVGTAAVTTRGLKEEDMKKIVQLIDRALRNHDNESELQSIRAEVNKWMIQFP
LY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagatacggttgtatttgacctcatcgcacaagaagaagacagacagaagcgc
ggcatagagctgattgcttcggaaaatttcaccagcaagcaggtcatggaggccgcaggc
agtgttttgaccaataaatatgcagaagggcttccaaaaaagcgctactatggtggatgc
gaggtggtcgatgagatcgagcaaattgctatcgacagagcaaagaagctctttggtgca
acttgggccaatgtgcagccccattccggtgcacaggctaatgctgctgtattcttggca
tgtttgaaagccggggatcctatcttgggctttgacctgtctcatggtggtcacctaact
catggatctccagtaaatttttccggaaaattatacgatcctcatttttatggagtagaa
gaagagaccggggtgattgattatgataaggtagaagccaaggcattagaagtaaaacca
aaaatgatcatttgcggagcttctgcatactctagagactgggattatgagcgtttgaga
gatattgctgatcaggtaggagcattattgttggcggatatttcccatccctcaggattg
attgcaagaggcttgttgaatgatccattggagttctgtcatatcgtgaccaccactact
cacaagaccctgagaggacctagagggggcttgatcttgatgagagaagactttgacaat
ccttggggattgactactccaaaaggcgaaatcaagaagatgtcttctttgctggatatg
ggtgtgttcccaggtactcagggaggaccattagagcatattatcgcagctaaggcagtt
gcatttgaagaggccttgtctgatgaatatatgacttatattcttcaagtgaagaaaaat
gcagccgtaatggcagaagagttcgtaagtctgggatatcagttgatttcaggaggaact
gacaatcatttgatgctaattgatcttcgaaataagaatcttactggaaagctggcagaa
gaaacattaggcaaagtagatatcactatcaataaaaacatggtcccattcgataccaag
tctccatttgtgacttccgggatgcgagtaggaactgccgcggtcaccacccgtggtctg
aaggaagaagatatgaaaaagatcgttcagctgattgaccgagctttgcgaaatcatgac
aatgaaagtgaattgcagagcatccgtgcagaagtcaataagtggatgattcagtttcca
ttatactaa
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