Algoriphagus sp. NBT04N3: GYM62_16860
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Entry
GYM62_16860 CDS
T09623
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYM62_16860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
algo03400
]
GYM62_16860
Enzymes [BR:
algo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
GYM62_16860
DNA repair and recombination proteins [BR:
algo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYM62_16860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Zn_ribbon_16
Motif
Other DBs
NCBI-ProteinID:
QYH40383
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All DBs
Position
complement(3889978..3890568)
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AA seq
196 aa
AA seq
DB search
MDTQSKIRCPWCLGFDQYVSYHDEEWGVPVYDDKIHFEFLVLESAQAGLSWATILKKREG
YRNAFADFDYKVVADFPDSYVEELLHDPGIIRNKLKIKAAINNAQRFMEVQQEFGSFSDY
IWSFVGGKPIQNKLQSMKDASATSAESDRLAKDLKKRGFKFLGSTTIYAHMQATGLVNDH
LVDCFRHSEVKKLQGS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggacactcaatcgaaaattcgctgcccttggtgtttgggatttgatcaatatgttagc
taccatgacgaagaatggggagttcctgtttatgatgataagattcattttgaattcctg
gttttggagtctgcccaagcaggattgagctgggcaacgatcctgaaaaagcgggaggga
tatagaaatgcttttgccgattttgattacaaagtggtcgctgactttcccgattcctat
gtagaagaattgctccacgatccgggaattattcgaaataagctcaaaattaaagcagct
atcaataatgctcaacgctttatggaggtacagcaagagttcggttctttttcagattat
atctggtctttcgtaggaggaaaacctattcaaaacaagcttcaaagtatgaaagatgct
tctgctacctcagctgaatccgaccgattggctaaggatctaaagaaaagaggctttaaa
tttttgggttccacaacaatctacgcccacatgcaggcaactggcttagtgaatgatcat
ttggtcgattgttttcggcatagtgaagtgaaaaaactgcaagggtcttaa
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