| Entry |
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| Name |
(GenBank) UvrD-helicase domain-containing protein
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| KO |
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| Organism |
algo Algoriphagus sp. NBT04N3
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:algo00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GYM62_19660
03430 Mismatch repair
GYM62_19660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:algo03400]
GYM62_19660
Enzymes [BR:algo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYM62_19660
DNA repair and recombination proteins [BR:algo03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GYM62_19660
MMR (mismatch excision repair)
Other MMR factors
GYM62_19660
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4536459..4538732
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| AA seq |
757 aa
MDYLKELNPPQREAVEHTEGPVMIIAGAGSGKTRVLTYRIAHLIYARGIDPFQILSLTFT
NKAAAEMKHRIESLVGLDARNTWMGTFHSVFAKILRVESEKIGYPSNFTIYDTDDSKSLI
RTIVKEMRLDDKVYKPGVVLSRISGAKNRLISWQAYQADPFVKADDEAAMKPKMGDIYQR
YQDRLFKAGAMDFDDLLFNTNVLFRDHIDVLNKYQQRFKYVMVDEFQDTNLSQYLITKKL
AAVHQNICVVGDDAQSIYAFRGADIQNILNFEKDYPDLMVVKLEQNYRSTKTIVEAANSI
IDKNKAQLKKTVWTSNPDGDLIELIKATSDNEEGRIVATTIFEEKNNKKLNNSDFAILYR
TNSQSRAIEEALRKMNLTYKIVGGLSFYQRKEIKDLMAYMRFTVNPVDEEAFKRIINYPK
RGIGDTSLEKILVAAYDHDMPLWDVVQNAQNFLPGRAGSSVDDFATMIKAFQIEVERKDA
YEAANSIAKQSGLLRELYEDKTIEGLNRYENVQELLNAIKEYVDNEENEDKSLGAFLQEI
ALLTDNDRDKDTTDAITLMTIHSSKGLEFKQVFVVGMEEDLFPSQMMMQSREDLEEERRL
FYVATTRAMEKLYLTYALTRYRFGRLLNCEPSRFLEEVDPSCIKVSKKLSATREMPGAFR
REGLPGSSAERPGFIGIKKKPESRVPAQMKIHTPSPDFKPSNTNNLQAEQLVEHPKFGFG
KVQKIEVEGLNRKATIQFEHFGEKTLLLSFAKLRIID |
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| NT seq |
2274 nt +upstreamnt +downstreamnt
atggattatctcaaagaacttaaccccccgcagcgggaagcagtagaacatacagaaggg
ccggtaatgattattgcgggcgcaggatctggaaagacccgggttttgacctatcggatc
gctcacctcatttatgcaagaggtatagatccttttcagattttatcgctcaccttcacc
aataaggcggcggcagaaatgaagcacaggattgagtctttggtaggtctggatgcgcgc
aatacctggatggggacttttcactctgttttcgctaagattttgagagttgaatccgaa
aaaataggctatccttccaatttcacgatttatgacacagatgactcgaagtctttgatc
cgtaccatcgtcaaagaaatgcgattggatgataaagtctacaaaccaggagtggtgctt
tcccgaatttccggggccaaaaaccgattgatttcctggcaggcctatcaagctgatcct
tttgtcaaagcggatgatgaggcagccatgaaacccaaaatgggagatatttatcagcgc
tatcaagatcgactttttaaagcgggagctatggattttgatgatttactatttaatacc
aatgtgcttttcagagatcacattgatgtattgaacaaataccagcagcgcttcaaatat
gtcatggtggatgagtttcaggatactaacctttctcaatacctgattaccaaaaagctg
gctgcagttcatcaaaatatctgtgtggtaggagatgatgcccaaagtatttatgctttt
cgcggagcggatatccagaatattctcaatttcgaaaaggactatccagatctgatggtg
gtcaaactggagcagaattacagatctaccaagactatcgtggaggcggctaactccatc
attgataaaaataaagcacaactgaaaaagaccgtttggacttccaaccctgacggagat
ctgatcgagctgatcaaggcaacttcagataatgaagaggggcgaatagttgcgaccaca
attttcgaagaaaaaaataacaaaaagcttaataacagcgactttgccattctttacagg
actaactctcagtctagagctatagaagaagccctgagaaagatgaatctgacctataag
attgtaggaggactttcattctatcagcgtaaagaaatcaaagacttgatggcttatatg
cgatttaccgttaatccggtagacgaagaggcctttaagcgcatcatcaattaccccaaa
agaggaattggagatacctctctggagaaaattttggttgctgcctacgatcatgatatg
cctttgtgggatgtggttcaaaatgctcaaaattttttacccggtcgagcaggaagctcg
gtggatgattttgctaccatgatcaaagcttttcagattgaagtggagcggaaagacgcc
tatgaagcagctaattccattgcgaagcagagcggtctattgagagaactgtatgaggat
aaaaccatagaaggactcaacagatatgaaaacgtacaggaattgctcaatgcaatcaaa
gagtacgtggacaatgaagaaaatgaggataaaagtctgggagcatttttacaggaaatt
gccctcttgacagacaatgaccgggacaaggataccaccgatgccattaccttgatgacc
attcactcctccaaaggcttggagtttaagcaggtttttgtggtaggaatggaagaggat
ttgtttccttcccagatgatgatgcagagcagggaagacttggaagaggagagaaggctg
ttctacgtggcgactacccgggcgatggaaaaattataccttacctatgctttgactcgt
tataggtttggtcgattgctgaattgtgagcctagcagattcctggaagaggttgatcca
agctgtatcaaagtgagtaaaaaactttccgcgaccagagagatgccgggagcatttaga
cgggagggtttacccggaagcagtgcagaaaggccgggtttcataggcattaagaaaaag
ccggagtcccgagtacctgctcaaatgaagattcatacgccaagtcctgacttcaaacca
agcaacaccaataatttacaggcggaacaactggtagagcatccgaagtttggttttgga
aaggttcaaaagattgaagttgaaggtcttaacagaaaggctacgattcagtttgaacat
tttggagagaagactttattacttagctttgcgaagctcagaattattgactaa |
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